Table 2

Haplotypes detected with the sequence information of BnFLC.A10 from 24 B. napus accessions
Haplotype Accession Origin Type InDel SNP Day to flowering
I*** II* IIIa IV* 1* 2* 3* 4 5 6
HapI Tapidor France Winter In DEL 6 DEL G T A G G A Non-flowering
Apache UK Winter In DEL 6 DEL G T A G G A Non-flowering
Bakow Poland Winter In DEL 6 DEL G T A G G A Non-flowering
Bienvenu France Winter In DEL 6 DEL G T A G G A Non-flowering
Brutor France Winter In DEL 6 DEL G T A G G A Non-flowering
Casino Sweden Winter In DEL 6 DEL G T A G G A Non-flowering
Quinta Germany Winter In DEL 6 DEL G T A G G A Non-flowering
HapII Alto Canada Spring DEL DEL 6 DEL G T A G G A 62
Bullet Canada Spring DEL DEL 6 DEL G T A G G A 64
Comet Denmark Spring DEL DEL 6 DEL G T A G G A 70
GULLR Sweden Spring DEL DEL 6 DEL G T A G G A 75
Westar Canada Spring DEL DEL 6 DEL G T A G G A 50
HapIII Qingyou2 China Spring DEL In 6 DEL G T A G G A 63
HapIV Erglu Australia Spring DEL In 7 In A C T G G A 69
HapV Gānyou5 China Semi-winter DEL In 7 In A C T A C G 64
Huashuang1 China Semi-winter DEL In 7 In A C T A C G 72
Huāyou4 China Semi-winter DEL In 7 In A C T A C G 63
Karoo Australia Spring DEL In 7 In A C T A C G 63
Suyou3 China Semi-winter DEL In 7 In A C T A C G 60
Xiangyou13 China Semi-winter DEL In 7 In A C T A C G 72
HapVI Erra Germany Spring DEL In 10 In A C T A C G 70
Jiayou1 China Spring DEL In 10 In A C T A C G 82
NingRS-1 China Semi-winter DEL In 10 In A C T A C G 81
Ningyou7 China Semi-winter DEL In 10 In A C T A C G 72

Symbols * and *** represent p = 0.05 and 0.001 levels of significance of each site’s influence on flowering time.

aThe repeats of the CTT motif in indel III; In = insertion; DEL = deletion.

Hou et al.

Hou et al. BMC Plant Biology 2012 12:238   doi:10.1186/1471-2229-12-238

Open Data