Table 3

Statistics of the assembly (unigene number and percentage) with the SOAPdenovo software
Control Cold-stressed Combined
100-500nt 48701 (72.6%) 57007 (77.46%) 39728 (62.99%)
500-1000nt 12066 (17.99%) 11880 (16.14%) 14121 (22.39%)
1000-1500nt 3539 (5.28%) 2987 (4.06%) 4897 (7.76%)
1500-2000nt 1479 (2.2%) 1054 (1.43%) 2220 (3.52%)
> = 2000nt 1296 (1.93%) 663 (0.9%) 2108 (3.34%)
N50 634 502 809
Mean 474 413 596
All Unigene 67,081 73,591 63,074
Length of all Unigene (nt) 31,789,071 30,382,210 37,575,882

Zhao et al.

Zhao et al. BMC Plant Biology 2012 12:222   doi:10.1186/1471-2229-12-222

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