Table 2

Statistics of the assembly (unigene number and percentage) with the Trinity method
Control Cold-stressed Combined
200-500nt 21,064 (45.52%) 26,284 (51.97%) 25,233 (45.99%)
500-1000nt 11,421 (24.68%) 12,215 (24.15%) 12,746 (23.23%)
1000-1500nt 6,190 (13.38%) 5,811 (11.49%) 7,290 (13.29%)
1500-2000nt 3,651 (7.89%) 3,193 (6.31%) 4,458 (8.12%)
> = 2000nt 3,946 (8.53%) 3,071 (6.07%) 5,143 (9.37%)
N50 1,335 1,136 1,401
Mean 868 754 888
All Unigene 46,272 50,574 54,870
Length of all Unigene (nt) 40,180,147 38,132,636 48,708,039

Zhao et al.

Zhao et al. BMC Plant Biology 2012 12:222   doi:10.1186/1471-2229-12-222

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