Table 3 |
||||
| Classification of repetitive elements in the assembled sequence | ||||
| Class | Order | Superfamily | No. elements | Cumulative length |
| Retrotransposons | 116 | 663,798 (62.7%) | ||
| LTR_retrotransposons | 108 | 647,191 (61.1%) | ||
| Copia | 46 | 236,440 (22.3%) | ||
| Gypsy | 50 | 354,331 (33.4%) | ||
| LINE | 8 | 16,607 (1.6%) | ||
| DNA transposons | 92 | 267,505 (25.2%) | ||
| TIR | 90 | 266,656 (25.2%) | ||
| CACTA | 39 | 256,633 (24.2%) | ||
| Harbinger | 2 | 433 (0.0%) | ||
| Mutator | 4 | 3,609 (0.3%) | ||
| Mariner | 41 | 5,096 (0.5%) | ||
| Unclassified | 349 | 128,095 (12.1%) | ||
| Total | 557 | 1,059,398 (100%) | ||
Bartoš et al. BMC Plant Biology 2012 12:155 doi:10.1186/1471-2229-12-155
