Table 3

Classification of repetitive elements in the assembled sequence
Class Order Superfamily No. elements Cumulative length
Retrotransposons 116 663,798 (62.7%)
LTR_retrotransposons 108 647,191 (61.1%)
Copia 46 236,440 (22.3%)
Gypsy 50 354,331 (33.4%)
LINE 8 16,607 (1.6%)
DNA transposons 92 267,505 (25.2%)
TIR 90 266,656 (25.2%)
CACTA 39 256,633 (24.2%)
Harbinger 2 433 (0.0%)
Mutator 4 3,609 (0.3%)
Mariner 41 5,096 (0.5%)
Unclassified 349 128,095 (12.1%)
Total 557 1,059,398 (100%)

BartoŇ° et al.

BartoŇ° et al. BMC Plant Biology 2012 12:155   doi:10.1186/1471-2229-12-155

Open Data