Table 4

Conserved miRNA targets and their putative functions
miRNA Target function Targeta Conserved withb
ath osa ptc pta tch
Cln-miR156 SBP-domain protein Unigene2030 (2) + + + + +
Unigene2872 (2)
Cln-miR158 Unknown Unigene28340 (4) +
Cln-miR164 Pentatricopeptide repeat-containing protein Unigene7992 (3) + + + +
Cln-miR168 Argonaute protein Unigene6526 (3) + + + + +
Cln-miR172 APETALA2-like protein Unigene17425 (1.5) + + + + +
Unigene56981 (0.5)
Cln-miR394 BolA-like family protein Unigene56583 (4) + +
Cln-miR400 Pentatricopeptide repeat-containing protein Unigene49313 (2) +
Unigene53642 (3)
Cln-miR408 Basic blue copper protein Unigene57297 (2) + +
Cln-miR828 MYB transcription factor Unigene2867 (2) +
Unigene15489 (2.5) +
Unigene42567 (2.5)
Cln-miR858 MYB transcription factor Unigene58181 (2.5)
Unigene22248 (2)
Unigene6437 (3)

a All predicted miRNA targets with penalty scores (shown in parentheses) of 4 or less are listed.

bAth, osa, ptc, pta and tch represent abbreviations for A. thaliana, O. sativa, P. trichocarpa, P. taeda and T. chinensis, respectively.

Wan et al.

Wan et al. BMC Plant Biology 2012 12:146   doi:10.1186/1471-2229-12-146

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