Open Access Research article

Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean

Yang Jae Kang1, Kil Hyun Kim1, Sangrea Shim1, Min Young Yoon1, Suli Sun1, Moon Young Kim1, Kyujung Van1 and Suk-Ha Lee12*

Author Affiliations

1 Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 151-921, South Korea

2 Plant Genomics and Breeding Institute, Seoul National University, Seoul, 151-921, South Korea

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BMC Plant Biology 2012, 12:139  doi:10.1186/1471-2229-12-139

Published: 9 August 2012

Additional files

Additional file 1:

Resistant QTL in the 2-Mb flanking region of CC-NBS-LRRs, TIR-NBS-LRRs and other NBS-LRRs.

Format: XLSX Size: 26KB Download file

Open Data

Additional file 2:

List of NBS-LRR regions with QTL in close proximity.

Format: XLSX Size: 20KB Download file

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Additional file 3:

Correlation between the number of NBS-LRR genes and the number of disease resistance QTL within the 2-Mb flanking region of NBS-LRR genes.

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Additional file 4:

The numbers of NBS-LRR genes and Leaflet Shape QTL on each chromosome.

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Additional file 5:

The number of QTL according to trait ontology under 2-Mb flanking regions of NBS-LRR genes.

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Additional file 6:

Ks values of NBS-LRR genes between recently duplicated regions and between tandemly duplicated regions.

Format: XLSX Size: 13KB Download file

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Additional file 7:

Information of qRT-PCR primers used for the confirmation of RNA-Seq analysis.

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Additional file 8:

qRT-PCR validation of RNA-Seq RPKM values with NBS-LRR genes and a RIN4-like gene.

Format: DOCX Size: 173KB Download file

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Additional file 9:

Differentially expressed NBS-LRRs in several experiments.

Format: XLSX Size: 13KB Download file

Open Data