Additional file 4.

Small RNA reads from four libraries that were mapped to the precursors of new candidate miRNAs. On each map, the first line contains the miRNA ID. The second line contains the miRNA precursor sequence, with mature miRNA region in red. The third line contains the notation of secondary structure with parentheses denoting base-pairing and dots denoting mismatches or bulges. The number on the right is the free energy. Every line starting from line 4 contains the sequence, mapping position, and count of a mapped unique small RNA read.

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Barrera-Figueroa et al. BMC Plant Biology 2012 12:132   doi:10.1186/1471-2229-12-132