Table 1

Nucleotide polymorphisms at the nine parsimony informative sites for clade Cp-II (lineages E1, E2, E3 and M).

Sites ^a

Accession

9,081

31,283

48,091

51,579

(psbG)

52,165

(ndhC)

67,653

83,304

(rpl14)

112,753

(ndhF)

122,532

O. woodiana

C

T

C

A

T

T

G

A

G

Maui 1

C

T

C

A

G

T

G

C

G

Almhiwit 5.1

C

G

C

A

T

T

G

C

G

Guangzhou 1

C

T

C

A

T

T

T

C

G

Gué de Constantine 20

T

T

A

A

T

T

G

C

G

Imouzzer S1

C

T

A

C

T

G

G

C

T

Haut Atlas

T

T

A

C

T

G

T

A

G

Manzanilla de Sevilla

T

G

C

C

G

G

T

A

T

*

*

*

Non-synonymous sites

L/F

F/L

L/W

^a Sites are defined by their location in the 'Manzanilla de Sevilla' sequence. When the site is located in a coding sequence, the gene name is given in brackets.

* For non-synonymous substitutions, amino-acid changes are indicated below.

Besnard et al. BMC Plant Biology 2011 11:80   doi:10.1186/1471-2229-11-80