Table 3

MiRNAs that displayed at least two fold change under drought stress only in CB46

Normalized Expression Level (TPTM)*


miRNA ID

503-C

503-D

CB46-C

CB46-D

Log2(503-D/503-C)

Log2(CB46-D/CB46-C)

Adjusted p-value (503-D vs. 503-C)

Adjusted p-value (CB46-D vs. CB46-C)

Putative target


miR166a

7796

12734

7334

21341

0.71

1.54

4e-177

0

REV

miR171b

406

441

195

397

0.12

1.02

1

3e-09

mRNA guanylyltransferase

miR171d

58

55

85

215

-0.08

1.33

1

2e-07

miR2111a

458

678

191

1105

0.57

2.53

5e-05

1e-106

kelch repeat-containing F-box protein

miR2111b

241

340

107

333

0.50

1.64

0.48

4e-17

kelch repeat-containing F-box protein

miR390b

52

33

110

34

-0.65

-1.69

1

8e-05

serine/threonine protein kinase

miR393

392

400

1120

258

0.03

-2.12

1

0

AFB3; AFB2

miR396b

4517

2958

5165

2411

-0.61

-1.10

0

0

growth-regulating factor 3

miR482

19518

10487

49339

13487

-0.90

-1.87

0

0

ARA12; serine-type endopeptidase

vun_cand030

848

431

531

196

-0.98

-1.44

0

0

zinc finger family protein


*TPTM: transcripts per ten million; 503-D and 503-C: IT93K503-1 under drought and control condition, respectively; CB46-D and CB46-C: CB46 under drought and control condition, respectively.

Barrera-Figueroa et al. BMC Plant Biology 2011 11:127   doi:10.1186/1471-2229-11-127

Open Data