Table 2

MiRNAs that displayed at least two fold change under drought stress only in IT93K503-1

Normalized Expression Level (TPTM)*

miRNA ID

503-C

503-D

CB46-C

CB46-D

Log2(503-D/503-C)

Log2(CB46-D/CB46-C)

Adjusted p-value (503-D vs. 503-C)

Adjusted p-value (CB46-D vs. CB46-C)

Putative target


miR1515

489

1366

1415

2700

1.48

0.93

5e-63

4e-60

miR160a

437

877

1048

1102

1.01

0.07

3e-21

1

ARF10

miR160b

13

244

139

178

4.18

0.35

9e-36

1

ARF10

miR167b

1649

4488

7539

13930

1.44

0.89

2e-201

1e-288

ARF8

miR171e

25

137

59

43

2.44

-0.45

4e-11

1

miR319b

1019

2638

685

1215

1.37

0.83

5e-109

2e-21

transferase family protein

miR390a

2141

7242

3586

5308

1.76

0.57

0

3e-49

leucine-rich repeat transmembrane protein kinase

vun_cand009

582

1519

1025

1903

1.38

0.89

4e-63

4e-39

vun_cand015

62

297

61

96

2.25

0.66

2e-23

1

RPL6A

vun_cand020

4462

12349

6115

10535

1.47

0.78

0

6e-177

pentatricopeptide repeat-containing protein

vun_cand033

478

172

96

113

-1.48

0.23

0

1

vun_cand048

746

263

0

2

-1.51

N/A

0

1


*TPTM: transcripts per ten million; 503-D and 503-C: IT93K503-1 under drought and control condition, respectively; CB46-D and CB46-C: CB46 under drought and control condition, respectively.

Barrera-Figueroa et al. BMC Plant Biology 2011 11:127   doi:10.1186/1471-2229-11-127

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