Table 1

Anthocyanin activating R2R3 MYBs transcription factors

Species

Current name

Genebank number

% similarity to AtMYB75 protein

% identity to AtMYB75

gDNA (bp)

CDS (bp)

protein (aa)

Intron2

(bp)


Arabidopsis thaliana

PAP1 AtMYB75

AF325123

100

100

1376

747

248

89

Arabidopsis thaliana

PAP2 AtMYB90

NM_105310

88

84

1349

750

249

82

Solanum lycopersicum (tomato)

ANT1

AY348870

56

41

n/a

825

274

n/a

Petunia hybrida

AN2

EF423868

66

45

n/a

768

255

n/a

Capsicum annuum

A

AJ608992

64

44

n/a

789

262

n/a

Vitis vinifera (grape)

VvMYB1a

AB242302

58

43

n/a

753

250

n/a

Zea mays (Maize)

P

AF292540

32

26

n/a

1131

376

n/a

Oryza sativa (Rice)

C1

Y15219

54

33

n/a

819

272

n/a

Ipomoea batatas (Sweet potato)

IbMYB1

AB258985

61

44

1194

750

249

313

Antirrhinum majus (snapdragon)

ROSEA1

DQ275529

66

52

n/a

663

220

n/a

Gerbera hybrid

GMYB10

AJ554700

58

44

n/a

753

250

n/a

Picea mariana

MBF1

PMU39448

30

41

n/a

1167

388

n/a

Malus domestica (apple)

MdMYB10

EU518249

60

47

4050

729

243

2995

Malus domestica (apple)

MdMYB1

DQ886414

60

47

4055

732

243

3000


Malus sylvestris (crab apple)

MsMYB10

EU153573

60

47

4036

732

243

2981

Cydonia oblonga (quince)

CoMYB10

EU153571

61

47

2436

738

245

1418

Eriobotrya japonica (loquat)

EjMYB10

EU153572

59

47

1520

741

246

498

Mespilus germanica (medlar)

MgMYB10

EU153574

60

47

2232

738

245

1168

Pyrus communis (Pear)

PcMYB10

EU153575

60

47

1545

735

244

487

Pyrus pyrifolia (Nashi)

PpyMYB10

EU153576

60

47

1541

735

244

483

Pyrus × bretschneideri (Chinese pear)

PbMYB10

EU153577

60

47

1546

735

244

488

Prunus armeniaca (Apricot)

ParMYB10

EU153578

61

49

2245

732

243

1211

Prunus insititia (Damson)

PiMYB10

EU153579

62

49

1924

732

242

882

Prunus domestica (European plum)

PdmMYB10

EU153580

60

48

2012

714

237

993

Prunus avium (sweet cherry)

PavMYB10

EU153581

61

50

2223

735

244

1123

Prunus cerasus (sour cherry)

PcrMYB10

EU153582

64

46

2291

678

225

1196

Prunus cerasifera (cherry plum)

PcfMYB10

EU153583

61

49

1960

732

243

926

Prunus dulcis (almond)

PdMYB10

EU155159

61

46

1796

678

225

812

Prunus persica (peach)

PprMYB10

EU155160

60

46

1845

675

224

947

Prunus salicina (Japanese plum)

PsMYB10

EU155161

60

49

1880

732

243

842

Fragaria × ananassa (strawberry)

FaMYB10

EU155162

62

45

1685

702

233

899

Fragaria vesca (strawberry)

FvMYB10

EU155163

62

44

1714

705

235

926

Rosa hybrida (rose)

RhMYB10

EU155164

59

40

1122

750

249

264

Rubus idaeus (red raspberry)

RiMYB10

EU155165

58

43

1685

654

217

806


MYB transcription factors, homologous to apple MdMYB10, from all the major rosaceous species (below the middle line), and the published anthocyanin MYB regulators from other species (above the middle line).

Lin-Wang et al. BMC Plant Biology 2010 10:50   doi:10.1186/1471-2229-10-50

Open Data