Table 3

Plant Ontology

Tissue

DAF

Ontology term

Ontology identifier


Young leaf

NA

0.4 Leaflets unfurled

SOY:0000252


Flower

NA

F0.4 Open flower

SOY:0001277


One cm pod

7 DAF

F0.7 Small size pod

SOY:0001280


Pod-shell

10-13 DAF

F0.8 Pod medium size

SOY:0001281


Pod-shell

14-17 DAF

F0.9 Full pod size

SOY:0001282


Seed

10-13 DAF

S1.06 Cotyledon stage

SOY:0001290


Seed

14-17 DAF

S1.06 Cotyledon stage

SOY:0001290


Seed

21 DAF

S1.07 Early maturity stage 1

SOY:0001291


Seed

25 DAF

S1.07 Early maturity stage 1

SOY:0001291


Seed

28 DAF

S1.07 Early maturity stage 1

SOY:0001291


Seed

35 DAF

S1.08 Early maturity stage 2

SOY:0001292


Seed

42 DAF

S1.09 Mid seed maturity

SOY:0001293


Root

NA

Root structures

SOY:0001183


Nodule

NA

Bacterial root nodule

SOY:0001301


Ontology terms for the 14 tissues in this study. Days After Flowering (DAF) are approximated based on pod length and seed size.

Severin et al. BMC Plant Biology 2010 10:160   doi:10.1186/1471-2229-10-160

Open Data