Table 1

Top 80 upregulated genes after addition of conditioned neuronal medium to Oli-neu cells

Probe set ID

Fold change

p-value

Gene name

Gene symbol


A_52_P624415

7.12

0.00015

transmembrane protein 10

Tmem10

A_51_P225761

6.96

0.00020

ESTs, no homologies found

A_52_P225856

6.76

0.00013

ESTs, no homologies found

A_52_P329250

6.51

0.00000

chromodomain helicase DNA binding protein 1

Chd1

A_51_P304109

6.41

0.00007

cytochrome P450, family 2, subfamily c, polypeptide 39

Cyp2c39

A_52_P160518

6.23

0.00005

Scm-like with four mbt domains 1

Sfmbt1

A_52_P771513

6.22

0.00027

ESTs, no homologies found

A_52_P61864

6.14

0.00023

wingless-related MMTV integration site 2

Wnt2

A_51_P370640

6.05

0.00013

zinc finger, CCHC domain containing 5

Zcchc5

A_51_P186092

6

0.00017

male sterility domain containing 2

Mlstd2

A_52_P24076

5.95

0.00026

myotubularin related protein 7

Mtmr7

A_52_P448870

5.9

0.00025

RAB26, member RAS oncogene family

Rab26

A_52_P193256

5.81

0.00032

DNA segment, Chr 10, Brigham & Women's Genetics 0791

D10Bwg0791e

A_52_P350750

5.81

0.00017

cholinergic receptor, nicotinic, alpha polypeptide 4

Chrna4

A_52_P391098

5.74

0.00022

cAMP responsive element modulator

Crem

A_51_P127035

5.72

0.00082

RIKEN cDNA 4432405B04 gene

4432405B04Rik

A_52_P600304

5.69

0.00013

RIKEN cDNA 1200007B05 gene

1200007B05Rik

A_51_P448632

5.68

0.00033

RIKEN cDNA C030022K24 gene

C030022K24Rik

A_52_P188593

5.68

0.00017

hypothetical gene supported by AK049058; BC025881

LOC433886

A_51_P359002

5.59

0.00028

ESTs, no homologies found

A_52_P302587

5.55

0.00021

chimerin (chimaerin) 2

Chn2

A_51_P444502

5.44

0.00029

immunoglobulin kappa light chain variable region Vk23

LOC381783

A_51_P461404

5.42

0.00014

SWI/SNF related, actin dependent regulator of chromatin

Smarca1

A_52_P577329

5.37

0.00021

RIKEN cDNA A230069A22 gene

A230069A22Rik

A_51_P334449

5.37

0.00033

olfactory receptor 50

Olfr50

A_52_P354306

5.32

0.00013

peroxisome biogenesis factor 26

Pex26

A_51_P462978

5.31

0.00033

membrane protein, palmitoylated 2

Mpp2

A_52_P661972

5.3

0.00021

RIKEN cDNA 9230112E08 gene

9230112E08Rik

A_52_P1133703

5.29

0.00014

CD47 antigen (Rh-related antigen)

Cd47

A_51_P169617

5.28

0.00041

TAF3 RNA polymerase II, TATA box binding protein

Taf3

A_51_P339934

5.24

0.00022

neurofilament, light polypeptide

Nefl

A_51_P472113

5.23

0.00060

ESTs, no homologies found

A_51_P262563

5.22

0.00031

ESTs, no homologies found

A_51_P284486

5.2

0.00030

glutathione S-transferase, mu 2

Gstm2

A_51_P103706

5.17

0.00054

cytochrome P450, family 2, subfamily c, polypeptide 29

Cyp2c29

A_52_P223626

5.17

0.00011

oligodendrocyte transcription factor 2

Olig2

A_51_P392209

5.17

0.00019

zinc finger protein 482

Zfp482

A_51_P283499

5.17

0.00022

dopamine receptor 4

Drd4

A_52_P229052

5.17

0.00019

transmembrane prot. with EGF-like and two follistatin-like

Tmeff2

A_52_P337910

5.15

0.00015

RIKEN cDNA E130114P18 gene

E130114P18Rik

A_51_P129108

5.11

0.00019

activating transcription factor 6

Atf6

A_51_P393934

5.11

0.00028

CD82 antigen

Cd82

A_51_P413005

5.08

0.00021

chimerin (chimaerin) 2

Chn2

A_51_P394574

5.05

0.00019

ESTs, no homologies found

A_51_P478003

5.04

0.00046

poly(A) polymerase gamma

Papolg

A_52_P516733

5.02

0.00086

DNA segment, Chr 15, ERATO Doi 621, expressed

D15Ertd621e

A_52_P127776

5.01

0.00030

ESTs, no homologies found

A_52_P384479

4.95

0.00014

leucine rich repeat and fibronectin type III domain

Lrfn5

A_52_P118323

4.93

0.00042

ESTs, no homologies found

A_52_P685963

4.91

0.00041

tenascin R

Tnr

A_52_P313068

4.83

0.00016

RIKEN cDNA 8030462N17 gene

8030462N17Rik

A_51_P489107

4.83

0.00013

pleckstrin homology domain-containing, family A, memb. 2

Plekha2

A_51_P454008

4.82

0.00027

lipopolysaccharide binding protein

Lbp

A_52_P418956

4.81

0.00059

RIKEN cDNA 4933431E20 gene

4933431E20Rik

A_51_P244453

4.8

0.00059

potassium channel tetramerisation domain containing 3

Kctd3

A_51_P342206

4.79

0.00890

cytochrome P450, family 2, subfamily c, polypeptide 38

Cyp2c38

A_51_P270899

4.78

0.00019

zinc finger protein 61

Zfp61

A_52_P370162

4.78

0.00034

G protein-coupled receptor 23

Gpr23

A_52_P356170

4.77

0.00024

glyceraldehyde-3-phosphate dehydrogenase, spermatogenic

Gapdhs

A_51_P130254

4.75

0.00021

pleckstrin and Sec7 domain containing 3

Psd3

A_51_P363461

4.73

0.00022

ESTs, no homologies found

A_52_P502838

4.72

0.00033

mannoside acetylglucosaminyltransferase 5

Mgat5

A_51_P494122

4.69

0.00050

RIKEN cDNA 1810009K13 gene

1810009K13Rik

A_52_P285194

4.69

0.00021

ESTs, no homologies found

A_51_P169087

4.67

0.00035

ESTs, no homologies found

A_51_P506822

4.65

0.00015

UDP galactosyltransferase 8A

Ugt8a

A_52_P164709

4.64

0.00030

WD repeat domain 51A

Wdr51a

A_51_P226269

4.62

0.00022

RIKEN cDNA 1190002H23 gene

1190002H23Rik

r60_a9

4.55

0.00003

fibronectin 1

Fn1

A_51_P111233

4.49

0.00013

dopamine receptor 2

Drd2

A_52_P265556

4.49

0.00042

predicted gene, ENSMUSG00000056850

ENSMUSG00000056850

A_52_P417654

4.47

0.00022

transcription elongation factor A (SII) 1

Tcea1

A_52_P625249

4.44

0.00021

cytochrome P450, family 2. subfamily c, polypeptide 37

Cyp2c37

A_52_P603038

4.44

0.00021

oligodendrocyte transcription factor 1

Olig1

A_51_P199199

4.42

0.00024

phosphoinositide-3-kinase adaptor protein 1

Pik3ap1

A_52_P510706

4.41

0.00030

DnaJ (Hsp40) homolog, subfamily A, member 2

Dnaja2

A_52_P57416

4.39

0.00044

ESTs, no homologies found

A_52_P322639

4.38

0.00031

ESTs, no homologies found

A_51_P232901

4.37

0.00007

cyclic nucleotide phosphodiesterase 1

Cnp1


Kippert et al. BMC Neuroscience 2008 9:40   doi:10.1186/1471-2202-9-40

Open Data