Table 2

Ontologic classification of genes differentially expressed at 24h and 28d (B).

Category

Number of sequences

% of total

p-value


Protein synthesis/ribosome

ribosome

18

5.20%

6.10E-12

protein biosynthesis

19

5.50%

3.60E-10

ribonucleoprotein complex

25

7.30%

1.80E-08

eukaryotic 43S preinitiation complex

7

2.00%

1.60E-05

eukaryotic 48S initiation complex

6

1.70%

6.00E-05

Protein folding

posttranslational protein folding

4

1.20%

2.40E-03

chaperone cofactor dependent protein folding

4

1.20%

1.40E-03

response to unfolded protein

6

1.70%

2.70E-03

Immune response

immunoglobulin domain

16

4.70%

4.90E-05

A-macroglobulin receptor

3

0.90%

1.20E-02

Regulatory pathway

response to stress

34

9.90%

5.50E-03

signal transduction inhibitor

4

1.20%

6.90E-03

cation binding

44

12.80%

3.60E-03

calmodulin binding

6

1.70%

7.50E-03


Functional analysis of differentially expressed transcript employed DAVID tools (see Methods for detailed description). To calculate background, Affychip has been used. Some transcripts represent in more than one category. Cutoff value for category selection p < 0.05.

Yukhananov and Kissin BMC Neuroscience 2008 9:32   doi:10.1186/1471-2202-9-32

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