Table 1

Genes selected for expression analysis

Gene Name
Gene Symbol
Cellular Function
Primer Sequence (5'-3')
Reference
Accession #

bactin1
bactin1
Cytoskeleton
F) CGAGCAGGAGATGGGAACC
14
AF057040



R) CAACGGAAACGCTCATTGC



tubulin, alpha 1
tuba1
Cytoskeleton
F) CCTGCTGGGAACTGTATTGT
*
AF029250



R) TCAATGAGTTCCTTGCCAAT



glyceraldehyde-3-phosphate dehydrogenase
gapdh
Glycolysis enzyme
F) GTGGAGTCTACTGGTGTCTTC
15
BC083506



R) GTGCAGGAGGCATTGCTTACA



glucose-6-phosphate dehydrogenase
g6pd
Glycolysis enzyme
F) GTCCCGAAAGGCTCCACTC
9
BM182602



R) CCTCCGCTTTCCTCTC



TATA-box-binding protein
tbp
Transcription
F) CGGTGGATCCTGCGAATTA
*
NM_200096



R) TGACAGGTTATGAAGCAAAACAACA



beta-2-microglobulin
b2m
Major histocompatibility complex
F) GCCTTCACCCCAGAGAAAGG
*
BC062841



R) GCGGTTGGGATTTACATGTTG



elongation factor 1-alpha
elfa
Translation
F) CTTCTCAGGCTGACTGTGC
16
AY422992



R) CCGCTAGCATTACCCTCC



18s ribosomal RNA
18s
Ribosome subunit
F) TCGCTAGTTGGCATCGTTTATG
17
BX296557



R) CGGAGGTTCGAAGACGATCA



cytochrome P450, family 19, subfamily A, polypeptide 1b
cyp19a1b
Steroid biosynthesis
F) AAAGAGTTACTAATAAAGATCCACCGGTAT
13
AF226619



R) TCCACAAGCTTTCCCATTTCA



cytochrome P450, family 1, subfamily A
cyp1a
Xenobiotic metabolism
F) GCATTACGATACGTTCGATAAGGAC
18
NM_131879



R) GCTCCGAATAGGTCATTGACGAT



The first 8 were candidate housekeeping genes. cyp19a1b and cyp1a, targets of ER and AhR mediated signal transduction, respectively, were used to tests effects of normalization on apparent gene expression. Asterisks (*) indicate primers designed in this study.

McCurley and Callard BMC Molecular Biology 2008 9:102   doi:10.1186/1471-2199-9-102