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Genes selected for expression analysis |
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| Gene Name |
Gene Symbol |
Cellular Function |
Primer Sequence (5'-3') |
Reference |
Accession # |
|
|
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| bactin1 |
bactin1 |
Cytoskeleton |
F) CGAGCAGGAGATGGGAACC |
14 |
AF057040 |
| R) CAACGGAAACGCTCATTGC |
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|
|
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| tubulin, alpha 1 |
tuba1 |
Cytoskeleton |
F) CCTGCTGGGAACTGTATTGT |
* |
AF029250 |
| R) TCAATGAGTTCCTTGCCAAT |
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|
|
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| glyceraldehyde-3-phosphate dehydrogenase |
gapdh |
Glycolysis enzyme |
F) GTGGAGTCTACTGGTGTCTTC |
15 |
BC083506 |
| R) GTGCAGGAGGCATTGCTTACA |
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|
|
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| glucose-6-phosphate dehydrogenase |
g6pd |
Glycolysis enzyme |
F) GTCCCGAAAGGCTCCACTC |
9 |
BM182602 |
| R) CCTCCGCTTTCCTCTC |
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|
|
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| TATA-box-binding protein |
tbp |
Transcription |
F) CGGTGGATCCTGCGAATTA |
* |
NM_200096 |
| R) TGACAGGTTATGAAGCAAAACAACA |
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|
|
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| beta-2-microglobulin |
b2m |
Major histocompatibility complex |
F) GCCTTCACCCCAGAGAAAGG |
* |
BC062841 |
| R) GCGGTTGGGATTTACATGTTG |
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|
|
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| elongation factor 1-alpha |
elfa |
Translation |
F) CTTCTCAGGCTGACTGTGC |
16 |
AY422992 |
| R) CCGCTAGCATTACCCTCC |
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|
|
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| 18s ribosomal RNA |
18s |
Ribosome subunit |
F) TCGCTAGTTGGCATCGTTTATG |
17 |
BX296557 |
| R) CGGAGGTTCGAAGACGATCA |
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|
|
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| cytochrome P450, family 19, subfamily A, polypeptide 1b |
cyp19a1b |
Steroid biosynthesis |
F) AAAGAGTTACTAATAAAGATCCACCGGTAT |
13 |
AF226619 |
| R) TCCACAAGCTTTCCCATTTCA |
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|
|
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| cytochrome P450, family 1, subfamily A |
cyp1a |
Xenobiotic metabolism |
F) GCATTACGATACGTTCGATAAGGAC |
18 |
NM_131879 |
| R) GCTCCGAATAGGTCATTGACGAT |
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|
The first 8 were candidate housekeeping genes. cyp19a1b and cyp1a, targets of ER and AhR mediated signal transduction, respectively, were used to tests effects of normalization on apparent gene expression. Asterisks (*) indicate primers designed in this study. | |||||
McCurley and Callard BMC Molecular Biology 2008 9:102 doi:10.1186/1471-2199-9-102 |
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