Table 1

DG genes details based on genomic DNA sequences available at the Ensembl databank

gene structure exon/intron (bp)


SPECIES

GENE

ID ENSEMBL

GENOME LOCATION

exon1

intron1

exon2

mini-intron

exon3

total length (bp)

precursor (aa)


H. sapiens

DAG1

ENSG00000173402

chromosome 3

285

19977

2403

no

no

22665

895

M. musculus

DAG1

ENSMUSG00000039952

chromosome 9

279

8351

2403

no

no

11033

893

D. rerio

DAG1

ENSDARG00000016153

chromosome 22

321

15186

2280

no

no

17787

866

T. rubripes

DAG1a

NEWSINFRUG00000153220

scaffold 2682

336

2938

435

137

> 1689

> 5674

> 820

T. rubripes

DAG1b

NEWSSINFRUG00000136139

scaffold 75

366

818

2307

no

no

3491

890

T. nigroviridis

DAG1a

GSTEN00009405001

scaffold SCAF11228

?

> 606

441

137

1857

> 3041

> 765

T. nigroviridis

DAG1b

GSTENG00033210001

scaffold SCAF15033

369

779

2313

no

no

3461

893

O. latipes

DAG1a

ENSORLG00000010935

chromosome 5

297

22628

459

86

1818

25288

857

O. latipes

DAG1b

ENSORLG00000009878

chromosome 7

312

839

2283

no

no

3434

864

G. aculeatus

DAG1a

ENSGACG00000003062

group XVII 379.49 k

?

?

462

116

1827

> 2405

> 762

G. aculeatus

DAG1b

ENSGACG00000002661

group XII 444.80 k

312

1026

2301

no

no

3639

870

D. labrax

DAG1a

NCBI accession code DQ149510

?

?

?

> 90

116

> 1783

> 1989

> 624


Details relative to the newly identified partial DG sequence from D. labrax are also included.

Pavoni et al. BMC Molecular Biology 2007 8:34   doi:10.1186/1471-2199-8-34

Open Data