Table 1

Duplicated genes with multiple TE exonization

No. of exons
TE
Gene
Accession
Description
Dup. gene
Dup. accession
Dup. description

3
AluSx AluJo MER5A
SRPN
NM_022807
small nuclear ribonucleo-protein polypeptide N
SNRPB
BC003530
small nuclear ribonucleo-protein polypeptides B and B1
2
AluSx AluJb
NCF1 pseudo-gene
BC002816
neutrophil cytosolic factor 1 pseudo-gene
NCF1
NM_000265
neutrophil cytosolic factor 1
2
AluSx AluJb
YY1AP1
BC025272
YY1 associated protein
GON4L
BX648802
gon-4-like protein
2
AluSp MIR
NSUN5C
NM_148936
NOL1/NOP2/Sun domain family member 5C
NSUN5
NM_018044
NOL1/NOP2/Sun domain family, member 5
2
AluY AluJb
RAP1A
NM_001010935
RAP1A, member of RAS oncogene family
RAP1B
NM_015646
RAP1B, member of RAS oncogene family
2
AluSx MSTA
POLR2J2
BC086857
RPB11b1beta protein (DNA directed RNA polymerase II polypeptide J-related)
POLR2J2
NM_032958
DNA directed RNA polymerase II polypeptide
2
AluSg/x AluJb
ZNF611
NM_030972
zinc finger protein 611
ZNF701
NM_018260
zinc finger protein 701
2
AluSq AluSp
ZNF702
NM_024924
zinc finger protein 702
ZNF137
NM_003438
zinc finger protein 137
3
MSTA MSTA MSTA
PMS2L14
AB017005
PMS2L14 protein.
PMS2
NM_000533
PMS2 postmeiotic segregation increased 2 isoform
2
AluJb AluY
ZNF283
AK098175
zinc finger protein 283
ZNF420
NM_144689
zinc finger protein 420
2
AluJo L1MA9
ZNF678
NM_178549
zinc finger protein 678
ZNF479
AF277624
zinc finger protein 479
2
AluSx LTR49
PILRB
NM_013440
paired immunoglobulin-like type 2 receptor beta
PVRIG
NM_024070
poliovirus receptor related immunoglobulin

Amit et al. BMC Molecular Biology 2007 8:109   doi:10.1186/1471-2199-8-109