Table 1

Reference genes used for gene expression normalization in soybean.

Gene symbol

Gene locus

NCBI Accession No.

Unigene ID

Arabidopsis ortholog locus

Arabidopsis locus description

Function


ACT11

Glyma18g52780.1

BW652479

Gma.32186

AT3G12110

Actin 11

Cytoskeletal structural protein

ACT2/7

Glyma04g39380.1

BW677100

Gma.30938

AT5G09810

Actin 2/7

Cytoskeletal structural protein

CYP

Glyma12g02790.1

CF806591

Gma.31618

AT2G21130

Cyclophilin

Protein folding

EF1b

Glyma02g44460.1

EV279336

Gma.2137

AT5G12110

Elongation factor 1β

Translational elongation

TUA5

Glyma05g29000.1

CA801144

Gma.13580

AT5G19780

alpha Tubulin

Structural constituent of cytoskeleton

TUB4

Glyma03g27970.1

EV263740

Gma.31016

AT5G12250

beta Tubulin

Structural constituent of cytoskeleton

UBQ10

Glyma07g32020.1

EH258122

Gma.17451

AT4G05320

Ubiquitin 10

Protein binding, protein modification

HDC

Glyma08g05480.1

CK768960

Gma.34482

AT1G58050

Nuclear helicase

Unwinding of the DNA double-helix

SKIP16

Glyma12g05510.1

CD397253

Gma.6079

AT1G06110

SKP1/Ask-Interacting Protein 16

Protein binding

MTP

Glyma03g29350.2

CF808703

Gma.7635

AT2G41790

Metalloprotease, Insulin degrading enzyme

Protein degradation

PEPKR1

Glyma10g38460.1

AW396185

Gma.23799

AT1G12580

Phosphoenolpyruvate Carboxylase-Related Kinase 1

Protein phosphorylation

TIP41

Glyma20g26690.1

EV263725

Gma.10647

At4G34270

TIP41-like family protein

TOR (Target of Rapamycin) signalling element

UKN1

Glyma12g02310.1

BU578186

Gma.32694

AT3G13410

Hypothetical protein

Unkown

UKN2

Glyma06g04180.1

BE330043

Gma.20882

AT4G33380

Hypothetical protein

Unkown


Hu et al. BMC Molecular Biology 2009 10:93   doi:10.1186/1471-2199-10-93

Open Data