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Open Access Research article

Identification of ColR binding consensus and prediction of regulon of ColRS two-component system

Paula A Kivistik, Rait Kivi, Maia Kivisaar and Rita Hõrak*

Author Affiliations

Estonian Biocentre and Institute of Molecular and Cell Biology, Tartu University, 51010 Tartu, Estonia

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BMC Molecular Biology 2009, 10:46  doi:10.1186/1471-2199-10-46

Published: 16 May 2009

Additional files

Additional file 1:

Predicted regulon of ColR in P. putida. Output of PredictRegulon web server listing potential targets of response regulator ColR in P. putida.

Format: DOC Size: 129KB Download file

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Open Data

Additional file 2:

Potential ColR target genes in Pseudomonas fluorescens PfO-1. Virtual footprint predictions with IUPAC input sequences (YYVASDNYTTTTTSAC) and (GTSAAAAARNHSTBRR) in Pseudomonas fluorescens PfO-1 genome.

Format: DOC Size: 654KB Download file

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Open Data

Additional file 3:

Oligonucleotides. Sequences of oligonucleotides used in a current study.

Format: DOC Size: 40KB Download file

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Open Data