Table 2

Primers combinations and number of different peak positions generated used in the selective amplification step.

Name

Primer I

Sequence (5'-3')

Primer II

Sequence (5'-3')

# Peaks


AT

EcoRI-A

GACTGCGTACCAATTCA

MseI-T

GATGAGTCCTGAGTAAT

250

CGC

EcoRI-C

GACTGCGTACCAATTCC

MseI-GC

GATGAGTCCTGAGTAAGC

202

TG

EcoRI-T

GACTGCGTACCAATTCT

MseI-G

GATGAGTCCTGAGTAAG

183

GG

EcoRI-G

GACTGCGTACCAATTCG

MseI-G

GATGAGTCCTGAGTAAG

250


Selective bases are in boldface.

Rezzonico et al. BMC Microbiology 2009 9:204   doi:10.1186/1471-2180-9-204

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