Research article
Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes
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* Corresponding author: Konrad Sachse konrad.sachse@fli.bund.de
1 Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Insitute of Molecular Pathogenesis, Jena, Germany
2 AFSSA, Unité Zoonoses Bactériennes, Maisons-Alfort, France
3 Friedrich-Loeffler-Institut (Federal Research Institute for Animal Health), Insitute of Bacterial Infections and Zoonoses, Jena, Germany
4 Clondiag Chip Technologies, Jena, Germany
BMC Microbiology 2008, 8:63 doi:10.1186/1471-2180-8-63
Published: 17 April 2008Additional files
Additional file 1:
Sequence similarity matrix. Calculated similarity matrix of all unique ompA sequences of C. psittaci strains, on which the split network graph in Fig. 1 is based.
Format: NEX Size: 266KB Download file
Additional file 3:
Basic data of C. psittaci strains included in Fig. 1 and the final ompA sequence alignment. Basic data of C. psittaci strains and GenBank accession numbers of ompA sequences included in the graph in Fig. 1 and the global ompA sequence alignment in Additional file 2
Format: XLS Size: 23KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 2:
Global alignment of ompA sequences found in the GenBank database. Alignment of 63 unique ompA sequences of C. psittaci strains from the GenBank database (992 positions)
Format: FNA Size: 64KB Download file