Table 3

Polymorphic sites among tuf-1 and tuf-2 from Brucella.

$Nt position

12

36

141

183

198

219

345

378

511

609

936

1158


#Bru↓|Nt→

T

C

C

T

C

T

C

A

G

A

A

G

C

T

C

T

C

A

G

A

C

T

C

T


Bab 9–941

X

X

X

X

X

X

X

X

X

X

X

2

1

Bab b1

X

X

X

X

X

X

X

X

X

X

X

X

Bab b2

X

X

X

X

X

X

X

X

X

X

X

2

1

Bab b3

X

X

X

X

X

X

X

X

X

X

X

X

Bab b4

X

X

X

X

X

X

X

X

X

X

X

2

1

Bab b5

X

X

X

X

X

X

X

X

X

X

X

X

Bab b6

X

X

X

X

X

X

X

X

X

X

X

X

Bab b9

X

X

X

X

X

X

X

X

X

X

X

X


B. suis b1

X

X

X

X

X

X

X

X

X

X

X

X

B. suis b2

1

2

X

X

X

X

X

X

X

X

X

X

X

B. suis b3

1

2

X

X

X

X

X

X

X

X

X

X

X

B. suis b4

X

X

X

X

X

X

X

X

X

X

X

X

B. suis b5

1

2

X

X

X

X

X

X

X

X

X

X

X


Bmel b1

X

X

X

X

X

X

X

X

X

X

X

X

Bmel b2

X

X

X

X

X

X

X

X

X

X

X

X

Bmel b3

X

X

X

X

X

X

X

X

X

X

X

X


Bneo

X

X

X

X

X

X

X

X

X

X

X

X

B. ovis

X

X

X

X

X

X

X

X

X

X

X

X

B. canis

1

2

X

X

X

X

X

X

X

X

X

X

X


Seal

1

2

X

X

X

X

X

X

X

X

X

X

X

Dolphin

1

2

X

X

X

X

X

X

X

X

X

X

X

Porpoise

X

X

X

X

X

X

X

X

X

X

X

X


$Nt = nucleotide; #Brucella strains, see Table 1; X = tuf-1 and tuf-2 have identical sequences; 1 = tuf-1 sequence only, 2 = tuf-2 sequence only. Polymorphic sites are in bold. tuf-1 and tuf-2 GenBank accession numbers are listed in Materials and methods.

Halling and Jensen BMC Microbiology 2006 6:84   doi:10.1186/1471-2180-6-84

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