Table 2

qRT-PCR detection of Las from plant samples that were collected from different locations in USA and China
Primer pairs CT value of qRT-PCR using infected plant DNA samples as template#
DNA samples from Florida, USA DNA samples from China
Home stead Orange Polk Lake wales Highlands de Soto St Lucie Hendry Hickory Hardee Charlotte Indian river Hai nan Jiang xi Guang xi Yun nan Guang dong
P1 23.46 22.24 25.33 22.35 24.72 26.35 23.84 26.00 28.89 26.88 24.71 23.73 27.28 UD 32.55 28.18 UD
P2 24.80 23.10 27.41 23.07 26.90 28.31 25.30 29.27 29.90 29.70 26.99 28.94 28.15 25.69 30.68 28.05 27.67
P3 23.97 22.56 25.03 22.64 24.48 26.06 24.11 25.72 28.62 27.99 24.94 24.31 27.11 UD 34.59 29.95 36.57
P4 24.99 23.03 27.71 23.07 27.12 28.30 25.29 28.49 29.03 27.64 27.46 28.12 28.27 25.77 31.48 27.91 28.03
P5 24.44 22.50 27.40 22.47 26.07 28.17 24.45 28.60 28.91 28.53 26.66 27.69 27.31 25.02 31.68 28.49 26.98
P6 25.49 23.16 28.02 23.26 27.14 29.03 25.27 28.84 29.70 30.08 27.53 28.79 27.68 25.26 33.54 27.79 29.30
P7 24.33 23.01 25.30 22.75 25.31 26.03 24.55 26.55 28.16 28.32 24.87 25.07 27.69 UD 34.71 30.97 UD
P8 23.85 22.73 25.80 22.64 24.62 26.00 23.84 26.20 27.66 26.14 25.58 24.20 27.47 UD 31.19 27.40 UD
P10 24.75 23.76 25.96 23.68 26.05 27.38 25.28 27.85 29.09 28.81 26.11 25.43 28.40 UD 31.74 30.97 UD
P11 25.89 24.02 28.51 24.84 28.55 30.52 26.60 30.52 31.72 30.66 28.08 30.54 28.47 26.09 37.56 35.41 29.28
P16 25.50 23.36 27.87 23.20 26.85 28.41 25.67 29.18 29.41 29.54 27.57 28.88 28.10 25.82 30.54 27.27 27.81
P17 25.95 24.09 28.18 23.65 27.54 29.36 26.61 29.90 29.50 31.09 28.14 30.92 29.34 27.01 36.12 30.28 29.20
P18 25.17 23.11 28.02 23.07 27.43 28.75 25.99 28.96 29.36 29.15 28.19 29.09 28.67 26.41 32.17 27.89 28.79
P23 26.41 24.05 29.28 24.35 28.04 30.22 27.75 31.15 32.14 32.95 29.77 31.48 30.31 27.67 36.73 30.86 30.63
P24 26.14 23.83 28.80 23.68 27.58 29.68 27.28 30.86 32.14 31.87 30.71 31.84 29.75 27.51 37.70 30.80 30.05
P25 25.04 22.68 27.97 22.90 26.67 28.28 25.92 28.63 29.04 30.80 27.30 29.77 27.81 25.47 36.49 29.31 29.31
P26 25.11 23.11 27.65 22.86 27.31 28.53 25.71 28.55 29.57 28.66 27.89 29.49 28.41 26.20 31.67 27.50 28.38
P29 24.73 22.72 27.21 22.60 26.65 27.85 25.42 29.36 29.56 29.28 27.17 29.13 27.39 25.33 34.12 28.03 27.51
P30 26.46 24.87 30.59 24.55 28.91 30.73 27.79 29.69 31.25 31.89 28.33 30.69 29.32 26.60 35.91 29.90 30.71
P31 27.19 25.05 29.83 24.77 29.43 31.03 27.88 31.23 32.67 31.14 29.94 30.71 30.28 27.96 34.28 29.94 31.58
P32 26.65 24.65 29.13 23.73 28.24 29.40 25.93 29.44 30.58 30.20 28.11 29.82 28.94 26.60 33.83 29.23 28.77
P33 25.55 23.35 28.08 23.33 27.03 28.42 26.32 30.32 30.58 30.36 27.83 29.79 28.41 25.80 32.99 30.71 28.37
P34 26.49 24.29 29.62 24.46 28.14 29.45 26.22 28.50 29.66 30.85 26.67 29.28 27.24 25.66 36.14 29.07 29.52
HLBas/r 24.76 22.97 27.55 22.80 31.02 29.94 27.24 27.45 28.02 27.20 28.90 27.95 27.06 25.04 30.40 25.93 25.78

#Las-infected plant DNA samples were collected from 12 different locations in Florida, USA, and 5 different locations in China. The CT values indicated are average of three replicates for each primer pairs. UD: Under determined.

Kogenaru et al.

Kogenaru et al. BMC Microbiology 2014 14:39   doi:10.1186/1471-2180-14-39

Open Data