Table 2

Base detected at SNPs by pyrosequencing, SCGs and PGGs
Base at SNP site
1977 74092 105139 232574 311613 913274 2460626 3352929 gyrA95 PGG SCG
G C A G T C C G C 1 2
G C C G T C C G C 1 3a
G C C G T C C G C 2 3b
G C C T T C Ca Ga C 2 3c
G C C T T C Aa Ga C 2 4
G C C G T C C C C 2 5
A C C G T C C C G 3 6a
A C C G G C C C G 3 6b
G T C G T G C G C 1 7
G C C G T G C G C 1 1
A C C G T C C G G 3 6c*

Table adapted from Bouakaze and co-workers [15] and ainferred from Filliol and coworkers [16]. *New pattern SCG-6c.

Cabal et al.

Cabal et al. BMC Microbiology 2014 14:21   doi:10.1186/1471-2180-14-21

Open Data