Table 1

Description of the 173 isolates of 2010 in Aragon analysed in this study
Family based on SpolDB4 Isolates genotyped by IS 6110 -RFLP and spoligotyping (N = 173) Isolates studied by SNPs and classified on SCG (N = 101) Isolates selected based on their different spoligotypes (N = 75)
AFRICANUM AFRI_1 1 1 (0.57%) 1 1 (0.99%) 1 1 (1.33%)
BEIJING BEIJING 1 1 (0.57%) 1 1 (0.99%) 1 1 (1.33%)
BOVIS BOVIS1 1 3 (1.7%) 1 3 (2.97%) 1 2 (2.66%)
BOVIS1_BCG 2 2 1
CAS CAS 2 2 (1.25%) 1 1 (0.99%) 1 1 (1.33%)
EAI EAI7_BGD2 1 1 (0.57%) 1 1 (0.99%) 1 1 (1.33%)
HAARLEM H1 15 41 (23.6%) 7 25 (24.75%) 6 15 (20%)
H2 6 2 1
H3 19 15 7
H3-T3 1 1 1
LAM LAM1 1 24 (13.8%) 1 17 (16.83%) 1 10 (13.33%)
LAM10_CAM 2 1 1
LAM12_MAD1 2 1 1
LAM2 2 2 1
LAM3 5 5 1
LAM9 12 7 5
S S 4 4 (2.31%) 3 3 (2.97%) 2 2 (2.66%)
X X1 3 5 (1.15%) 1 2 (1.98%) 1 2 (2.66%)
X2 2 1 1
T T1 27 34 (19.6%) 12 16 (15.84%) 9 13 (17.33%)
T2 2 1 1
T4_CEU1 2 1 1
T5 1 1 1
T5_MAD2 2 1 1
U U 24 26 (15.0%) 10 12 (11.88%) 7 9 (12.00%)
U (LAM3?) 2 2 2
No family NO SIT 31 31 (17.9%) 19 19 (18.81%) 18 18 (24.00%)

Cabal et al.

Cabal et al. BMC Microbiology 2014 14:21   doi:10.1186/1471-2180-14-21

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