Table 2

Total detected gene number, gene overlap, unique, diversity indices of soil samplea
Unique and overlap genes SJY-GH SJY-DR SJY-QML SJY-CD SJY-ZD SJY-YS
SJY-GH 1044(27.87%) 2029(42.94%) 1655(37.26%) 1264(30.00%) 1261(29.84%) 1178(27.22%)
SJY-DR 617(20.51%) 1485(38.33%) 1171(32.81%) 1163(32.43%) 1107(30.24%)
SJY-QML 403(17.14%) 1049(34.57%) 1062(35.05%) 973(31.01%)
SJY-CD 242(13.97%) 916(35.82%) 840(31.67%)
SJY-ZD 248(14.24%) 816(30.39%)
SJY-YS 321(18.24%)
Total no. of genes detected 3746 3008 2351 1732 1741 1760
Shannon weaver index 8.22 8.01 7.76 7.45 7.46 7.47
Simpson’s reciprocal diversity index (1/D) 3716 2988 2340 1723 1733 1752

a Values in parentheses are percentages. Italicized values indicate the number of overlapping genes between samples, boldface values indicate the number of unique genes in each sample.

Zhang et al.

Zhang et al. BMC Microbiology 2013 13:72   doi:10.1186/1471-2180-13-72

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