Table 3

List of all S. Heidelberg CRISPR-MVLST Sequence Types (HSTs) that were identified in this study
HST Frequency Allelic profile
fimH sseL CRISPR1 CRISPR2
HST 7 48 17 19 167 32
HST 8 1 17 19 168 209
HST 9 10 17 19 167 209
HST 10 1 17 19 169 32
HST 11 1 17 19 170 32
HST 12 1 17 19 171 32
HST 13 1 18 19 167 32
HST 14 2 17 19 179 32
HST 15 3 17 19 167 212
HST 16 1 17 19 173 213
HST 17 3 17 19 172 32
HST 18 1 17 19 178 32
HST 19 1 17 67 174 209
HST 20 1 17 19 175 32
HST 21 7 17 19 167 211
HST 22 2 17 19 167 210
HST 23 1 17 19 177 32
HST 24 1 17 19 167 214
HST 25 1 17 19 176 32
HST 26 1 17 19 177 215
HST 27 1 17 19 167 215

The numbers represent the allelic identifier for the individual CRISPR-MVLST markers. The combination of four specific alleles defines a given HST. The frequency is the number of times a particular HST was observed among the 89 S. Heidelberg isolates analyzed. All HSTs identified here were new and not seen in previous studies.

Shariat et al.

Shariat et al. BMC Microbiology 2013 13:254   doi:10.1186/1471-2180-13-254

Open Data