Table 3

Proteins found to be differentially regulated by σC, as determined by a proteomic comparison between L. monocytogenes 10403S ΔBHL and ΔBCHL
Proteina Fold change ΔBHL/ΔBCHL Description Gene name Role categoryb Sub-Role categoryb
Proteins with positive fold change (> 1.5) and p < 0.05 (indicating positive regulation by σC)
Lmo0096c 3.19 mannose-specific PTS system IIAB component ManL mptA Energy metabolism Pyruvate dehydrogenase
Amino acid biosynthesis Aromatic amino acid family
Transport and binding proteins Carbohydrates, organic alcohols, and acids
Proteins with negative fold change (< -1.5) and p < 0.05 (indicating negative regulation by σC)
Lmo2094 −1.82 hypothetical protein lmo2094 Energy metabolism Sugars
Lmo1902 −1.61 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Biosynthesis of cofactors, prosthetic groups, and carriers Pantothenate and coenzyme A

aProtein names are based on the L. monocytogenes EGD-e locus.

bRole Categories and Sub-Role categories are based on JCVI classification [26].

cPreceded by a putative σL promoter;

cagaac ; -12 and -24 regions are underlined.

Mujahid et al.

Mujahid et al. BMC Microbiology 2013 13:156   doi:10.1186/1471-2180-13-156

Open Data