Additional file 9 .
Table S1. Base distribution output used in primer and probe design, with the bolded base signifying the selected base(s) and incorporation of more than one allele at a given nucleotide position was accomplished using degenerate bases. The alignment position information in the base distribution file contains many gaps as a result from the sequence alignment and differs from the E. coli region information from Table 1.
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Liu et al. BMC Microbiology 2012 12:56 doi:10.1186/1471-2180-12-56