Table 1

General features of the 20 coding sequences identified in the Kp13cpsgene cluster
ORF Size (bp) %GC Gene name Product EC number Best BLASTP hit (accession number) (identity)
KP03136 900 59.02 galF UTP--glucose-1-phosphate uridylyltransferase 2.7.7.9 K. pneumoniae strain NK8 (BAI43699) (100%)
KP03135 627 58.41 orf2 Uncharacterized phosphatidic acid phosphatase protein 3.1.3.4 K. pneumoniae strain MGH 78578 (ABR77932) (100%) and strain VGH404 serotype K5 (BAI43755) (100%).
KP03809 1,431 55.99 wzi Capsule assembly 55.8 kDa protein K. pneumoniae strain VGH484 serotype K9 (BAI43775) (98%)
KP03808 1,131 45.15 wza Capsule polysaccharide export protein K. pneumoniae strain VGH484 serotype K9 (BAI43776) (97%)
KP03807 438 39.69 wzb Protein-tyrosine-phosphatase 3.1.3.48 K. pneumoniae strain MGH 78578 (ABR77929) (78%)
KP03806 2,154 35.61 wzc Uncharacterized tyrosine-protein kinase 2.7.10.- K. pneumoniae strain MGH 78578 (ABR77928) (79%)
KP31533 1,446 35.2 wbaP Undecaprenolphosphate Gal-1-P transferase 2.-.-.- K. pneumoniae strain MGH 78578 (ABR77927) (79%)
KP03804 906 37.51 orf8 Uncharacterized glycosyltransferase family 2 2.4.1- K. pneumoniae strain A1517 (BAF75773) (67%)
KP03803 894 30.99 orf9 Uncharacterized glycosyltransferase family 2 2.4.1- Dickeya dadantii (ADM97617) (63%)
KP03802 759 29.79 orf10 Uncharacterized glycosyltransferase 2.4.1.- D. dadantii (ADM97619) (57%)
KP31534 1,404 51.46 gnd 6-phosphogluconate dehydrogenase, decarboxylating 1.1.1.44 K. pneumoniae strain VGH484 serotype K9 (BAI43786) (99%)
KP31530 1,062 59.25 rmlB dTDP-D-glucose 4,6-dehydratase 4.2.1.46 K. pneumoniae strain VGH484 serotype K9 (BAI43787) (98%)
KP03797 867 58.74 rmlA Glucose-1-phosphate thymidylyltransferase 2.7.7.24 Escherichia coli HS (EFK17576) (98%)
KP03796 888 61.5 rmlD dTDP-4-dehydrorhamnose reductase 1.1.1.133 K. pneumoniae strain MGH 78578 (ABR77913) (98%)
KP03795 552 54.41 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase 5.1.3.13 K. pneumoniae strain VGH484 serotype K9 (BAI43790) (99%)
KP03794 1,164 50.82 ugd UDP-glucose 6-dehydrogenase 1.1.1.22 K. pneumoniae strain NK8 (BAI43716) (100%) and strain VGH404 serotype K5 (BAI43755) (100%)
KP03793 999 41.92 uge-1 Uridine diphosphate galacturonate 4-epimerase 5.1.3.6 K. pneumoniae subsp. rhinoscleromatis ATCC 13884 (EEW43608) (97%)
KP31531 1,233 31.57 wzx K-antigen flippase Wzx E. coli TA27 (ZP_07523140) (64%)
KP03791 990 31.32 orf19 Uncharacterized glycosyltransferase family 2 2.4.1.- Cronobacter sakazakii (ABX51890) (33%)
KP03789 1,044 29.61 wzy K antigen polymerase Wzy Thermoanaerobacter wiegelii (ACF14522) (35%)

Ramos et al.

Ramos et al. BMC Microbiology 2012 12:173   doi:10.1186/1471-2180-12-173

Open Data