Table 5

Phylogenetic information about the OTUs corresponding to the excised and sequenced DGGE bands

Bands N°

Number of sequenced clones

OTUs

Nearest uncultivated species accession no°,% similarity


B1

12

Phylum: Picocyanobacteria

Synechococcus sp

AY224199, 98%

B2

10

Class: β-proteobacteria

Genus: Curvibacter

EU703347, 98

EU642369, 99%

B2

1

Class: β-proteobacteria

Genus: Burkholderia

EU642141, 98%

B2

1

Class: β-proteobacteria

Genus: Burkholderia

EU801155, 97%

EU63973669, 96%

B3

9

Phylum: Actinobacteria

Clade: acI

FJ916243, 99%

B4

11

Phylum: Actinobacteria

Unidentified

FN668296, 99%

B5

10

Phylum: Actinobacteria

Unidentified

FN668268, 100%

B5

1

Unclassified bacteria

B6

12

Phylum: Actinobacteria

Unidentified

FJ916291, 99%

B7

11

Phylum: Actinobacteria

Unidentified

DQ316369, 99%

B8

8

Phylum: Actinobacteria

Unidentified

AJ575506, 99%

B8

3

Unclassified bacteria


Berdjeb et al. BMC Microbiology 2011 11:88   doi:10.1186/1471-2180-11-88

Open Data