Table 1

Chlamydial sequences analysed in this study

Species

Strain

Origin

Host

Pathology

Sequence reference


C. abortus

S26/3

Scotland

Sheep

Abortion

[62]

C. caviae

GPIC

USA

Guinea Pig

Conjunctivitis

[63]

C. felis

Fe/C-56

Japan

Cat

Pneumonia

[64]

C. muridarum

Nigg

USA

Mouse

Pneumonia

[65]

C. pecorum

824

Scotland

Sheep

Conjunctivitis

[21]

C. pecorum

AB10

France

Sheep

Abortion

[21]

C. pecorum

AKT

Tunis

Sheep

Abortion

[21]

C. pecorum

BE53

England

Cattle

Encephalymylitis

[21]

C. pecorum

E58

USA

Cattle

Encephalomylitis

[21]

C. pecorum

iB1

France

Sheep

Healthy (faeces)

[21]

C. pecorum

iB2

France

Sheep

Healthy (faeces)

[21]

C. pecorum

iB3

France

Sheep

Healthy (faeces)

[21]

C. pecorum

iB4

France

Sheep

Healthy (faeces)

[21]

C. pecorum

iB5

France

Sheep

Healthy (faeces)

[21]

C. pecorum

iC2

France

Goat

Healthy (faeces)

[21]

C. pecorum

iC3

France

Goat

Healthy (faeces)

[21]

C. pecorum

iC4

France

Goat

Healthy (faeces)

[21]

C. pecorum

LW679

USA

Sheep

Arthritis

[21]

C. pecorum

M14

Morocco

Goat

Abortion

[21]

C. pecorum

MC/MarsBar

Australia

Koala

Genital tract infection

(this work)

C. pecorum

R69

Ireland

Sheep

Healthy (faeces)

[21]

C. pecorum

SBE

England

Cattle

Encephalomylitis

[21]

C. pecorum

VB2

France

Sheep

Orchitis

[21]

C. pecorum

W73

Ireland

Sheep

Healthy (faeces)

[21]

C. pneumoniae

CWL029

USA

Human

Pneumonia

[62]

C. trachomatis

A/HAR-13

Saudi Arabia

Human

Conjunctivitis

[63]

C. trachomatis

B/Jali20/OT

The Gambia

Human

Conjunctivitis

[62]

C. trachomatis

B/TZ1A828/OT

Tanzania

Human

Conjunctivitis

[64]

C. trachomatis

D/UW-3/CX

USA

Human

Genital tract infection

[65]

C. trachomatis

L2/434/Bu

USA

Human

Bubo

[66]

C. trachomatis

L2b/UCH-1/proctitis

England

Human

Proctitis

[66]


Marsh et al. BMC Microbiology 2011 11:77   doi:10.1186/1471-2180-11-77

Open Data