Table 2

Number of Differentially Expressed Genes in Δfur

Differentially Expressed Genes in Δfur


Cluster of Orthologous

Groups

Number of

Genes

"Fur

Repressed"a

Number of

Genes

"Fur

Activated"b

Total


No COG

30

9

39

Energy Production and Conversion

16

18

34

Cell Cycle Control

3

0

3

Amino Acid Metabolism and Transport

7

16

23

Nucleotide Metabolism and Transport

7

4

11

Carbohydrate Metabolism and Transport

9

4

13

Coenzyme Metabolism and Transport

6

0

6

Lipid Metabolism and Transport

5

0

5

Translation

46

0

46

Transcription

9

2

11

Replication, Recombination, and Repair

5

1

6

Cell Wall/Membrane/Envelope Biogenesis

14

3

17

Cell Motility

1

0

1

Post-Translational Modification, Protein Turnover, Chaperone Functions

10

1

11

Inorganic Ion Transport and Metabolism

20

2

22

Secondary Metabolite Biosynthesis, Transport, and Catabolism

5

4

9

General Functional Prediction Only

15

4

19

Function Unknown

9

2

11

Signal Transduction Mechanisms

5

2

7

Intracellular Trafficking and Secretion

3

0

3

Defense Mechanisms

1

0

1


Total

226

72

298


Categorized According to Cluster of Orthologous Groups (COGs)

a Genes with increased expression in the absence of fur

b Genes with decreased expression in the absence of fur

Troxell et al. BMC Microbiology 2011 11:236   doi:10.1186/1471-2180-11-236

Open Data