Table 4

All PPIs discovered in this study

Bait

Prey

Bfun

Pfun

NN

NC

CC

CN

Vectors

Notes


1.

A

A

head

head

NC

CC

CN

3

Possible

2.

A

Bet

head

rec

G

1

3.

A

FI

head

head

NC

CC'

CN'

3

Known

4.

A

NinF

head

ukn

G

1

5.

A

Nu1

head

head

G'

NC'

CC

3

Known

6.

A

Orf79

head

unk

G

1

7.

A

V

head

tail

G

1

8.

Cl

Cl

trx

trx

CC

1

Known

9.

Cl

Kil

trx

other

CC

1

10.

Cll

Cll

trx

trx

NC

1

known

11.

C

C

head

head

NC

1

12.

C

Nu3

head

head

G'

NC'

2

Known

13.

C

Orf79

head

unk

G

1

14.

D

D

head

head

NC

1

Known

15.

D

E

head

head

D

1

Known

16.

E

E

head

head

D

1

Known

17.

E

Fi

head

head

G

NC

CC'

CN'

4

Known

18.

E

Nu3

head

head

DG'

2

2v

19.

Ea8.5

Ea8.5

ihr

unk

NC

1

Possible

20.

Ea8.5

Int

ihr

rec

G

NC

2

2v

21.

Ea8.5

Tfa

ihr

tail

G

1

22.

Ea8.5

Stf

ihr

tail

G

CN

2

23.

Ea8.5

Q

ihr

trx

G

1

24.

Ea8.5

Ren

ihr

unk

NC

1

25.

FI

NinB

head

rec

CN

1

26.

G

G

tail

tail

G

CC

CN

3

Possible

27.

G

H

tail

tail

D'

1

Known

28.

G

S'

tail

lysis

G

CN

2

2v

29.

G

T

tail

tail

CC

1

Likely

30.

H

Cll

tail

trx

NC

1

31.

H

Ren

tail

unk

NC

1

32.

H

V

tail

tail

NC

1

Known

33.

Int

A

rec

head

G

1

34.

Int

Bet

rec

rec

G

1

Possible

35.

Int

Int

rec

rec

G

NC

2

known

36.

Int

Orf48

rec

unk

G

1

37.

Int

Tfa

rec

tail

CN

1

38.

Int

V

rec

tail

G

1

39.

M

Fi

tail

head

CC'

CN'

2

2v

40.

M

G

tail

tail

G

CC

CN

3

Possible

41.

M

NinF

tail

unk

G

CN

2

2v

42.

M

Nu3

tail

head

CN

1

43.

M

Orf35

tail

unk

NC

CC

2

2v

44.

N

Bet

trx

rec

G

1

45.

N

Ea47

trx

unk

G

1

46.

N

L

trx

tail

G

1

47.

N

Nu1

trx

head

NC

1

48.

N

V

trx

tail

G

1

49.

NinD

Cro

unk

trx

G

1

50.

NinD

K

unk

tail

G

NC

2

2v

51.

NinD

Q

unk

trx

G

1

52.

NinI

N

unk

trx

G

1

53.

NinI

Q

unk

trx

G

1

54.

Nu1

Nu1

head

head

NC

CC

2

2v

55.

Nu1

Tfa

head

tail

G

1

56.

Nu1

Orf64

head

unk

CC

1

57.

Nu1

R

head

lysis

D

1

58.

Nu1

V

head

tail

G

1

59.

Nu3

Nu3

head

head

G

1

60.

Nu3

Z

head

tail

G

1

61.

O

P

repl

repl

D

1

Known

62.

Orf35

Cll

unk

trx

NC

1

63.

Orf35

Int

unk

rec

G

NC

2

2v

64.

Orf35

K

unk

tail

G

NC

2

2v

65.

Orf35

Orf78

unk

unk

NC

1

66.

Orf35

Ren

unk

unk

NC

1

67.

Orf48

Orf48

unk

unk

NC

1

Possible

68.

Orf79

Orf79

unk

unk

CC

CN

2

Possible

69.

Orf63

N

rec

trx

G

1

70.

Orf63

Orf78

rec

unk

NC

1

71.

Orf63

P

rec

repl

NC

1

72.

Orf63

Q

rec

trx

G

1

73.

Orf63

Ren

rec

unk

NC

1

74.

Orf63

Rz1

rec

lysis

G

1

75.

P

Bet

repl

rec

G

1

76.

P

Q

repl

trx

G

1

77.

RexB

A

conv

head

NC

1

78.

RexB

Orf48

conv

unk

NC

1

79.

RexB

Orf78

conv

unk

NC

1

80.

RexB

Ren

conv

unk

NC

1

81.

S'

S'

lysis

lysis

G

1

82.

U

Ea47

tail

unk

CC

CN

2

2v

83.

U

NinB

tail

rec

CN

1

84.

U

NinE

tail

unk

CN

1

85.

U

NinF

tail

unk

CN

1

86.

U

Orf78

tail

unk

NC

1

87.

U

U

tail

tail

CC

1

known

88.

U

Xis

tail

rec

NC

1

89.

V

G

tail

tail

D

NC

2

Known

90.

W

B

head

head

NC

1

Known

91.

U

Cl

tail

trx

CN

1

92.

M

Rz1

tail

lysis

CC

CN

2

2v

93.

Orf79

NinB

unk

rec

CN

1

94.

Int

G

rec

tail

G

CN

2

2v

95.

Ea.85

NinB

unk

rec

CN

1

96.

S'

NinB

lysis

rec

CN

1

97.

S'

Rz1

lysis

lysis

CN

1


Bfun = bait protein function, Pfun = prey protein function group (rec = recombination, repl = replication, trx = transcription, conv = lysogenic conversion, ihr - inhibition of host replication [76]). NN, CN, NC, CC indicated the fusion type of the bait and prey proteins (see text). The two NN vectors are indicated by G (pGBK/pGAD) and D (pDEST22/32). Interaction that have been found in inverted prey-bait combinations are indicated by a prime sign ('). Interactions that have been found in both bait-prey and prey-bait orientations are indicated by bold and primes (e.g. NC'), respectively. Interactions without any note are unexpected and may not be physiologically relevant. 2v = interactions found with 2 vector pairs. Stf = Orf314.

Rajagopala et al. BMC Microbiology 2011 11:213   doi:10.1186/1471-2180-11-213

Open Data