Hierarchial clustering (HCL) analysis of differentially expressed SD1 proteins based on APEX abundance values using MeV. Protein abundance values from the in vitro sample are represented on the left, with in vivo protein abundances on the right. Abundance magnitude is depicted as a color gradient, with red indicating an increase in protein abundance, green indicating a corresponding decrease in abundance, and black for the median level of abundance. Based on biological interests, example clusters are enlarged to depict differentially expressed proteins.
Kuntumalla et al. BMC Microbiology 2011 11:147 doi:10.1186/1471-2180-11-147