Table 3

Prediction performance of selected representative servers in order to exclude all false positives

Server

Thr3

TP (binding)

TN (binding)

FP (binding)

FN (binding)

TP (tumor epitopes)

TP (viral epitopes)


BIMAS (A)

2

10

143

0

23

76 (89%)

39 (89%)

MHCP_I (A)

10

0

143

0

33

2 (2%)

1 (2%)

IEDB_SMM (B)

1,000

10

143

0

23

77 (91%)

38 (86%)

NHP_CP (C)

0.5

6

143

0

27

76 (89%)

40 (91%)

IEDB_ANN (D)

10,000

9

143

0

24

76 (89%)

39 (89%)

MULTI_SVM (D)

5.8

4

143

0

29

75 (88%)

40 (91%)

NETM_ANN (D)

10,000

15

143

0

18

80 (94%)

41 (93%)


Lin et al. BMC Immunology 2008 9:8   doi:10.1186/1471-2172-9-8

Open Data