Table 1

Biclustering results of different methods for simulated data using the plaid model

Sensitivity

Specificity

Overlapping rate

# of clusters


ISA (0.6, 1)

1

0.84

0.99

0.84

0

0.12

1

3

ISA (0.6, 1.2)

0.95

0.53

0.84

0.90

0.06

0.08

10

8

ISA (0.7, 1.1)

0.84

0.68

0.91

0.84

0

0.16

10

8

SAMBA

0.43

0.39

0.99

0.99

0.31

0.3

7

14

CC*

1

0.98

0

0

0.02

0

10

10

OPSMs

0.38

0.25

0.94

0.96

0.3

0.5

11

12

Plaid

1

1

1

0.73

0

0.63

1

11

BBC**

1

1

1

1

0

0

1

3


Note: *In CC's method, the number of clusters is preset to be 10. **In BBC, the overlapping rate is automatically 0.

Gu and Liu BMC Genomics 2008 9(Suppl 1):S4   doi:10.1186/1471-2164-9-S1-S4

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