Table 4

Mean and standard deviation (in parentheses) of specificity scores (%), calculated over 50 hold out runs.

DATASET

ALL

GA-FS

H-MTL

GA-MTL

GA-MTL-IR

e-GA-MTL


M = 2 for ANN


Breast

53.0(9.9)

58.8(8.6)

52.9(9.0)

70.7(8.7)

64.7(9.2)

64.8(9.2)

Colon

71.3(10.2)

64.7(9.5)

73.4(8.4)

85.7(9.8)

85.7(9.1)

85.7(8.4)

Leukemia

55.6(7.5)

44.4(8.3)

55.4(8.1)

71.7(7.8)

77.8(7.5)

83.3(7.4)

Ovarian

55.6(6.1)

64.9(6.2)

74.4(6.1)

77.7(7.6)

79.7(7.3)

81.5(7.0)

Average

58.5(8.4)

58.6(8.1)

64.3(8.0)

76.1(8.4)

76.3(8.2)

78.8(8.0)


M = 10 for ANN


Breast

48.1(8.8)

55.4(8.4)

65.1(8.0)

69.2(8.1)

63.9(9.6)

66.8(8.4)

Colon

71.3(10.0)

85.3(9.7)

83.5(10.5)

92.2(9.7)

93.1(10.0)

92.6(10.8)

Leukemia

65.4(8.5)

77.4(7.8)

75.6(8.1)

64.8(6.8)

78.4(6.2)

91.5(6.0)

Ovarian

61.3(5.1)

65.6(5.9)

77.0(4.3)

79.4(5.0)

87.0(5.4)

80.4(5.5)

Average

61.0(8.1)

71.8(8.1)

75.8(7.6)

78.1(7.9)

82.2(7.8)

82.6(7.6)


Yang et al. BMC Genomics 2008 9(Suppl 1):S3   doi:10.1186/1471-2164-9-S1-S3

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