Table 3

Potential symbiosis-related genes in A. palmata

Unigene ID*

Length (nt)

#cDNAs

Blastx hit (nr)

e value


3742400

538

2

homothorax 1, homeodomain

10-36

3741518

411

3

chromobox homolog 1

10-18

3742103

376

2

THAP DNA binding domain

10-5

3740339

1444

3

aspartyl protease

10-136

3740760

793

3

leucine carboxyl methyltransferase 1

10-59

3741304

512

2

phosphoplipase A2 inhibitor

10-3

3740726

526

2

type III collagen

10-13

3742809

1601

17

no

3743087

956

3

no

3740331

862

3

no

3741565

1147

2

no

3740122

1045

2

no

3742400

636

2

no

3741088

585

2

no

3743345

444

2

no


* Criteria for inclusion were that the unigenes must be expressed in both symbiotic life history stages and absent from all of the non-symbiotic stages.

Schwarz et al. BMC Genomics 2008 9:97   doi:10.1186/1471-2164-9-97

Open Data