Table 1

Annotation of ESTs and unigenes (assembled EST clusters)

ESTs submitted to GenBank


Library

Abbrev

A. palmata

M. faveolata

Spawned eggs1

SE

4018

201

Early planulae2

EP

2114

408

Late planulae (uninfected2

LPU

3111

1125

Late planulae (infected)

LPI

3323

559

Adult colony

AC

2022

1561


EST Unigene sets


Total # cDNAs

8524

2273

# unigenes

4980

1732

Average # cDNAs/unigene

1.94

1.41


Unigene Blast annotations (1e-5)


% nr blastx hits

31%

21%

% swissprot hits

25%

17%

% GO hits

26%

17%


Unigenes with no blast hits


# encoding > 300 nt ORF

892

300

# encoding > 300 nt ORF with M

574

160

# ORFs + SignalP NN/HMM

97/111

22/28


1A. palmata 96 hr and M. faveolata 60 hr post fertilization

2A. palmata 15 days and M. faveolata 13 days post fertilization

Schwarz et al. BMC Genomics 2008 9:97   doi:10.1186/1471-2164-9-97

Open Data