Table 3

Characteristics of nucleotide substitutions at Skts5

5'UTR

Neutral

AA

3'UTR

Potential splice sites

SnoRNA

Total

Frequency of substitution/nt


C:G to T:A

27

203

41

140

13

10

434

0.00309


T:A to C:G

30

142

40

123

6

14

355

0.00253


C:G to A:T

7

26

19

52

0

6

110

0.00078


T:A to G:C

9

26

7

29

0

2

73

0.00052


C:G to G:C

8

19

18

25

1

2

73

0.00052


T:A to A:T

9

9

7

35

3

1

64

0.00046


total

90

425

132

404

23

35

1109

0.0079


Frequency of substitution/nt

0.00064

0.00303

0.00094

0.00288

0.00016

0.00025

0.0079


AA = amino acid substitution, UTR = untranslated region, nt = nucleotide

Mahler et al. BMC Genomics 2008 9:626   doi:10.1186/1471-2164-9-626

Open Data