Research article
Sequence divergence of Mus spretus and Mus musculus across a skin cancer susceptibility locus
1 Division of Human Cancer Genetics, Department of Molecular Virology, Immunology and Medical Genetics, OSU Comprehensive Cancer Center, The Ohio State University, OH, USA
2 Molecular, Cellular and Developmental Biology Graduate Program, The Ohio State University, OH, USA
3 Integrated Biomedical Science Graduate Program, The Ohio State University, OH, USA
4 Cancer Research Institute, University of California, San Francisco, San Francisco, CA, USA
5 Division of Human Genetics, Department of Internal Medicine, The Ohio State University, Columbus, OH, USA
BMC Genomics 2008, 9:626 doi:10.1186/1471-2164-9-626
Published: 23 December 2008Additional files
Additional file 1:
Table 1: Genes mapping to Skts5. This table shows a list of all genes mapping to Skts5 including their Ensembl reference number.
Format: XLS Size: 18KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 2:
Table 2: All sequence variants identified at Skts5. This table shows all the sequence variants identified in the study, the strain of mouse in which it was found, the amino acid change if applicable, and the rs number if previously entered in dbSNP.
Format: XLS Size: 220KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 3:
Table 3: Genes showing strong conservation across species. This table shows a list of amino acid changes that appear to be strongly conserved across species. In red are the amino acids that match M. musculus and in blue are the amino acids that match M. Spretus. The corresponding amino acids in nine species as well as the mouse strains sequenced in the study are shown.
Format: XLS Size: 23KB Download file
This file can be viewed with: Microsoft Excel Viewer
Additional file 4:
Table 4: Primers for each exon for sequencing and splice site analysis. This table lists all forward and reverse primers used for sequencing in this study.
Format: XLS Size: 128KB Download file
This file can be viewed with: Microsoft Excel Viewer
