Table 1

Significantly regulated miRNAs on Exiqon chips from SAS analysis

Name of miRNAs on chip

miRNA name in rat*

Lsmean animal PKD

Lsmean animal Control

Log Fold Change PKD_Ctrl

-log10(p-value) for log fold change of PKD_Ctrl


hsa-miR-21

rno-miR-21

0.80

0.24

0.56

4.50

hsa-miR-302c-star

-0.63

-0.33

-0.30

3.32

hsa-miR-31

rno-mir-31

-0.47

-0.13

-0.34

3.22

hsa-miR-302c

-0.76

-0.30

-0.46

3.22

hsa-miR-217

rno-mir-217

-0.74

-0.41

-0.33

3.09

mmu-miR-34b

rno-mir-34b

-0.59

-0.35

-0.24

3.00

hsa-miR-126-star

rno-mir-126-star

-0.32

-0.07

-0.25

2.98

hsa-miR-7

rno-mir-7

-0.60

-0.23

-0.37

2.92

hsa-miR-128b

rno-mir-128

-0.69

-0.37

-0.32

2.92

hsa-miR-302b-star

-0.53

-0.27

-0.26

2.76

hsa-miR-136

rno-mir-136

-0.70

-0.37

-0.33

2.75

hsa-miR-99a

rno-mir-99a

-0.40

-0.14

-0.26

2.68

hsa-miR-448

rno-mir-448

-0.55

-0.27

-0.28

2.64

mmu-miR-380-3p

rno-mir-380

-0.63

-0.12

-0.51

2.62

hsa-miR-20

rno-mir-20

-0.31

-0.12

-0.19

2.58

hsa-miR-96

rno-mir-96

-0.65

-0.40

-0.26

2.57

hsa-miR-372

-0.75

-0.46

-0.29

2.55

mmu-miR-7b

rno-mir-7b

-0.46

-0.13

-0.34

2.48

hsa-miR-379

rno-mir-379

-0.74

-0.40

-0.34

2.47

hsa-miR-203

rno-mir-203

-0.50

-0.23

-0.27

2.34

hsa-miR-147

rno-mir-147

-0.66

-0.42

-0.23

2.16

hsa-miR-196a

rno-mir-196a

0.13

0.38

-0.25

2.10

hsa-miR-335

rno-mir-335

-0.72

-0.21

-0.51

1.94

hsa-miR-216

rno-mir-216

-0.70

-0.41

-0.29

1.94

hsa-miR-128a

rno-mir-128

-0.65

-0.32

-0.33

1.92

hsa-miR-30a-3p

rno-mir-30a

-0.15

0.03

-0.18

1.90

hsa-miR-148a

-0.39

-0.27

-0.12

1.85

hsa-miR-181b

rno-mir-181b

-0.35

-0.14

-0.20

1.80

hsa-miR-346

rno-mir-346

-0.69

-0.39

-0.30

1.78

hsa-miR-377

rno-mir-377

-0.58

-0.35

-0.23

1.75


*miRNA probes present on Exiqon chip start with name "hsa-" and "mmu-" as shown in column 1. The miRNAs listed here are conserved in "Rat", shown in column 2.

Pandey et al. BMC Genomics 2008 9:624   doi:10.1186/1471-2164-9-624

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