Research article
A first glimpse at the transcriptome of Physarum polycephalum
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* Corresponding author: Gernot Glöckner gernot@fli-leibniz.de
1 Leibniz Institute for Age Research – Fritz Lipmann Institute, Beutenbergstr. 11, D-07745 Jena, Germany
2 Sektion für Biologische Chemie, Biozentrum der Medizinischen Universität Innsbruck, Fritz-Pregl-Str 3, A-6020 Innsbruck, Austria
3 Magdeburg Centre for Systems Biology, Otto von Guericke University and Max-Planck-Institut für Dynamik komplexer technischer Systeme, Sandtorstr. 1, D-39106 Magdeburg, Germany
BMC Genomics 2008, 9:6 doi:10.1186/1471-2164-9-6
Published: 7 January 2008Additional files
Additional File 1:
Blast summary table. Blast summary table for all EST contigs including additional information on number of ESTs, EST IDs, alternative splicing, Interpro domains.
Format: TXT Size: 4MB Download file
Additional File 2:
Signal transduction and cell cycle pathways. KEGG assignments of EST contigs for signal transduction and cell cycle.
Format: TXT Size: 14KB Download file
Additional File 3:
Summary of interpro domain hits for the assembled contigs. A summary table for domains in all EST clusters detected via interproscan.
Format: DOC Size: 47KB Download file
This file can be viewed with: Microsoft Word Viewer
Additional File 4:
Alignments. Example alignments of alternatively spliced transcripts with genomic DNA.
Format: TXT Size: 56KB Download file
Additional File 5:
Intron sequences determined. Sequences of introns used for the calculation of the splice site signatures and description of corresponding genes.
Format: DOC Size: 117KB Download file
This file can be viewed with: Microsoft Word Viewer