Table 3

Level of synonymous substitution (Ks) between homologous sequences in M. acuminata and M. balbisiana.

Locus

Length

Ks

Predicted function


L4

1065

0.0496

GDSL-motif lipase/hydrolase family protein

L5

1401

0.0311

protein kinase family protein

L7

1341

0.0318

hypothetical protein

L9

1647

0.0252

protein kinase family protein

L11

825

0.0323

protein kinase-related

L13

2901

0.0420

leucine-rich repeat-containing protein kinase family protein

L15

1140

0.0435

gibberellin 20-oxidase family protein

L16

1899

0.0342

glucose-inhibited division A family protein

L18 *

1371

0.0960

leucine rich repeat family protein

L20

4119

0.0231

transcriptional repressor protein-related

L23

1941

0.0369

protein kinase family protein

L24

1737

0.0413

exostosin family protein

L26

2145

0.0461

kinesin light chain-related

Ks mean

23532

0.0410

Concatenation Ks

23532

0.0349


* Alignments between the M. acuminata gene and the orthologous sequence on the M. balbisiana sequence were identified by BLAST

Lescot et al. BMC Genomics 2008 9:58   doi:10.1186/1471-2164-9-58

Open Data