Figure 3.

Results of case study I in "Gene group analysis". (A) Reference case taken from Chawade et al., 2007 [10]. The genes used in the case study are At4g17550.1, At1g20450.1, At5g52310.1, At4g37150.1, and At1g20440.1. The origin of the arrow indicates the regulating TF family and the endpoint of the arrow indicates the target gene. The time scale shown on the vertical axis is cold treatment of plant. (B) CBFHV (AP2) displayed co-occurrences in At4g17550.1, At1g20450.1, At5g52310.1, At4g37150.1, and At1g20440.1 (C) CBFHV (AP2) and DOF represented combinatorial co-occurrences in At5g52310.1, At4g17550.1, At4g37150.1, and At1g20440.1 with 100 bp distance constraint between CBFHV and DOF.

Chang et al. BMC Genomics 2008 9:561   doi:10.1186/1471-2164-9-561
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