|
The PP2C gene family of rice |
||||||
| Gene |
Gene name |
Size(aa) |
Mass(kDa) |
pI |
alternative splicing |
Expression* |
|
|
||||||
| LOC_Os01g07090 |
OsPP2C01 |
332 |
35.43 |
4.69 |
B C D E |
|
| LOC_Os01g19130 |
OsPP2C02 |
381 |
41.82 |
4.59 |
B C D E |
|
| LOC_Os01g32964 |
OsPP2C03 |
335 |
35.90 |
7.91 |
B C D E |
|
| LOC_Os01g36080 |
OsPP2C04 |
658 |
73.19 |
6.26 |
4 |
B C D E |
| LOC_Os01g37130 |
OsPP2C05 |
390 |
41.74 |
5.51 |
2 |
B C D E |
| LOC_Os01g40094 |
OsPP2C06 |
468 |
48.63 |
4.77 |
B C |
|
| LOC_Os01g43100 |
OsPP2C07 |
392 |
41.81 |
8.41 |
B C |
|
| LOC_Os01g46760 |
OsPP2C08 |
404 |
43.00 |
5.44 |
B C D |
|
| LOC_Os01g62760 |
OsPP2C09 |
415 |
43.99 |
5.25 |
B C D E |
|
| LOC_Os02g05630 |
OsPP2C10 |
349 |
37.57 |
5.02 |
3 |
B C D E |
| LOC_Os02g08364 |
OsPP2C11 |
363 |
39.71 |
5.04 |
B C D E |
|
| LOC_Os02g13100 |
OsPP2C12 |
390 |
41.00 |
5.88 |
B C D E |
|
| LOC_Os02g15594 |
OsPP2C13 |
364 |
38.96 |
5.53 |
C D |
|
| LOC_Os02g27220 |
OsPP2C14 |
519 |
55.29 |
8.71 |
B C D E |
|
| LOC_Os02g35910 |
OsPP2C15 |
443 |
48.01 |
5.72 |
B C D |
|
| LOC_Os02g38580 |
OsPP2C16 |
522 |
56.26 |
4.66 |
C D |
|
| LOC_Os02g38690 |
OsPP2C17 |
764 |
82.81 |
4.81 |
B |
|
| LOC_Os02g38710 |
OsPP2C18 |
805 |
84.98 |
4.21 |
B C D |
|
| LOC_Os02g38780 |
OsPP2C19 |
653 |
71.41 |
4.65 |
3 |
B C D |
| LOC_Os02g38804 |
OsPP2C20 |
518 |
56.55 |
4.51 |
B C |
|
| LOC_Os02g39410 |
OsPP2C21 |
341 |
53.76 |
10.82 |
3 |
B C D |
| LOC_Os02g39480 |
OsPP2C22 |
582 |
63.30 |
4.88 |
||
| LOC_Os02g42250 |
OsPP2C23 |
320 |
34.73 |
4.99 |
||
| LOC_Os02g42270 |
OsPP2C24 |
316 |
33.45 |
5.28 |
||
| LOC_Os02g46080 |
OsPP2C25 |
388 |
43.01 |
8.55 |
2 |
B D |
| LOC_Os02g46490 |
OsPP2C26 |
597 |
64.83 |
5.75 |
B C D E |
|
| LOC_Os02g55560 |
OsPP2C27 |
185 |
39.27 |
4.9 |
2 |
B C D E |
| LOC_Os03g04430 |
OsPP2C28 |
400 |
44.29 |
8.77 |
3 |
B C D |
| LOC_Os03g10950 |
OsPP2C29 |
393 |
42.51 |
8.22 |
B C D |
|
| LOC_Os03g16170 |
OsPP2C30 |
405 |
43.28 |
5.71 |
B C D E |
|
| LOC_Os03g16760 |
OsPP2C31 |
632 |
68.74 |
6.39 |
B C D |
|
| LOC_Os03g18150 |
OsPP2C32 |
392 |
41.31 |
6.37 |
B C E |
|
| LOC_Os03g18970 |
OsPP2C33 |
433 |
45.83 |
6.69 |
B C D |
|
| LOC_Os03g55320 |
OsPP2C34 |
381 |
41.75 |
9.79 |
3 |
B C D E |
| LOC_Os03g60650 |
OsPP2C35 |
640 |
69.18 |
5.31 |
B C D E |
|
| LOC_Os03g61690 |
OsPP2C36 |
387 |
42.02 |
7.25 |
2 |
B C D |
| LOC_Os04g08560 |
OsPP2C37 |
435 |
44.81 |
7.24 |
B C |
|
| LOC_Os04g25570 |
OsPP2C38 |
461 |
49.69 |
6.78 |
B C D |
|
| LOC_Os04g33080 |
OsPP2C39 |
521 |
57.32 |
4.57 |
B C E |
|
| LOC_Os04g37660 |
OsPP2C40 |
462 |
48.71 |
6.32 |
2 |
B C |
| LOC_Os04g37904 |
OsPP2C41 |
285 |
31.01 |
6.25 |
3 |
B C E |
| LOC_Os04g42260 |
OsPP2C42 |
353 |
38.17 |
6.83 |
B C |
|
| LOC_Os04g49490 |
OsPP2C43 |
389 |
43.19 |
6.51 |
B C |
|
| LOC_Os04g52000 |
OsPP2C44 |
322 |
34.77 |
8.66 |
B C D E |
|
| LOC_Os04g56450 |
OsPP2C45 |
283 |
30.58 |
4.75 |
2 |
B C D E |
| LOC_Os05g02110 |
OsPP2C46 |
594 |
63.48 |
5.28 |
B |
|
| LOC_Os05g04360 |
OsPP2C47 |
390 |
42.38 |
4.55 |
B C D E |
|
| LOC_Os05g29030 |
OsPP2C48 |
354 |
38.10 |
7.38 |
2 |
B C D |
| LOC_Os05g38290 |
OsPP2C49 |
417 |
43.78 |
8.33 |
B C E |
|
| LOC_Os05g46040 |
OsPP2C50 |
388 |
41.55 |
5.97 |
2 |
B C |
| LOC_Os05g49730 |
OsPP2C51 |
382 |
40.35 |
7.83 |
B C D |
|
| LOC_Os05g50970 |
OsPP2C52 |
492 |
52.92 |
4.49 |
B C D |
|
| LOC_Os05g51510 |
OsPP2C53 |
446 |
46.68 |
4.67 |
2 |
B C D E |
| LOC_Os06g08140 |
OsPP2C54 |
361 |
39.35 |
4.98 |
B C D |
|
| LOC_Os06g33530 |
OsPP2C55 |
354 |
38.29 |
10.56 |
B E |
|
| LOC_Os06g33549 |
OsPP2C56 |
353 |
37.81 |
8.48 |
B C E |
|
| LOC_Os06g39600 |
OsPP2C57 |
368 |
39.44 |
5.17 |
2 |
B C D |
| LOC_Os06g44210 |
OsPP2C58 |
369 |
40.59 |
4.71 |
2 |
B C D E |
| LOC_Os06g48300 |
OsPP2C59 |
328 |
34.94 |
4.39 |
B C D E |
|
| LOC_Os06g50380 |
OsPP2C60 |
393 |
43.58 |
8.65 |
2 |
B C D E |
| LOC_Os07g02330 |
OsPP2C61 |
378 |
40.62 |
8.24 |
B C D E |
|
| LOC_Os07g32380 |
OsPP2C62 |
291 |
31.74 |
6.97 |
B C |
|
| LOC_Os07g33230 |
OsPP2C63 |
224 |
24.68 |
7.05 |
B |
|
| LOC_Os07g37890 |
OsPP2C64 |
428 |
46.30 |
5.55 |
B C D E |
|
| LOC_Os07g45170 |
OsPP2C65 |
446 |
47.22 |
5.62 |
B C |
|
| LOC_Os08g39100 |
OsPP2C66 |
532 |
57.67 |
5 |
B C D |
|
| LOC_Os09g14540 |
OsPP2C67 |
368 |
39.39 |
6.83 |
B C D |
|
| LOC_Os09g15670 |
OsPP2C68 |
359 |
37.70 |
6.5 |
B C D |
|
| LOC_Os09g28560 |
OsPP2C69 |
423 |
45.81 |
5.34 |
C |
|
| LOC_Os09g38550 |
OsPP2C70 |
352 |
38.47 |
5.08 |
4 |
B C D E |
| LOC_Os10g22460 |
OsPP2C71 |
466 |
48.49 |
4.08 |
B C D |
|
| LOC_Os10g39780 |
OsPP2C72 |
335 |
36.76 |
6.84 |
4 |
B C D E |
| LOC_Os11g01790 |
OsPP2C73 |
421 |
46.26 |
5.85 |
B C D |
|
| LOC_Os11g13820 |
OsPP2C74 |
398 |
41.35 |
6.64 |
C |
|
| LOC_Os11g22404 |
OsPP2C75 |
433 |
47.11 |
6.12 |
B C D |
|
| LOC_Os11g37540 |
OsPP2C76 |
1116 |
127.19 |
6.98 |
B C E |
|
| LOC_Os12g09640 |
OsPP2C77 |
422 |
435.57 |
7.32 |
B C |
|
| LOC_Os12g39120 |
OsPP2C78 |
393 |
43.53 |
8.61 |
B C D |
|
|
*Evidence for gene expression inferred from (B) massively parallel signature sequencing (MPSS), (C) EST clones, (D) full-length cDNA clones and (E) serial analysis of gene expression (SAGE). | ||||||
Xue et al. BMC Genomics 2008 9:550 doi:10.1186/1471-2164-9-550 |
||||||