Table 1

Basic genomic features of four putative allergen genes identified from the MB1-73 plant (F1 hybrid between 'Texas' almond and 'Earlygold' peach)

Genes1
Total length2
ORF
Exon 12
Intron 12
Exon 22
Intron 22
Exon 3
GenBank accessions3
Bin-map4

Pru p/du 1.01
586
483
184
98
299


EU424239, EU424240
1:14
Pru p/du 1.02
772/762
483
184
233/223
299


EU424241, EU424242
1:14
Pru p/du 1.03
624
483
184
105/102
299


EU424243, EU424244
1:14
Pru p/du 1.04
615/622
480
184
124/131
296


EU424245, EU424246
1:14
Pru p/du 1.05
1503/1510
483
184
135
299


EU424247, EU424248
1:14
Pru p/du 1.06A
1871/2096
483
184
105/109
299


EU424251, EU424252
1:14
Pru p/du 1.06B
589
483
184
105
299


EU424249, EU424250
1:14
Pru p 1.06C
1432
483
184
109
299


EU424253
1:14
Pru p/du 2.01A
882/879
741
61
105/108
680


EU424256, EU424257
3:37
Pru p/du 2.01B
892
741
61
118
680


EU424258, EU424259
3:37
Pru p/du 2.02
1373/1271
741/729
52/58
118/180
689/671


EU424254, EU424255
7:25
Pru p/du 2.03
1296/1290
783/834
61
160
722/773


EU424260, EU424261
8:41
Pru p/du 2.04
1799/1825
993
61
110
694
678/704
238
EU424262, EU424263
1:50
Pru p/du 3.01
645
354
344
193
10


EU424264, EU424265
6:74
Pru p/du 3.02
514/513
372
362
98/97
10


EU424266, EU424267
6:74
Pru p/du 3.03
528/527
351
341
104/103
10


EU424268, EU424269
6:74
Pru p/du 4.01
1041
396
123
391
138
210
135
EU424270, EU424271
1:73
Pru p/du 4.02
754
396
123
209
138
131
135
EU424272, EU424273
7:56

1 p and du represent peach (P. persica) and almond (P. dulcis), respectively.

2 x/y indicates two different DNA lengths from 'Texas' and 'Earlygold' allele, the first is for 'Texas'.

3 Two accessions are from alleles of 'Texas' almond and 'Earlygold' peach respectively.

4 Bin map position is indicated by a first digit corresponding to the linkage group number followed by a colon and the distance in cM from the top of the linkage group to the last marker of this bin (i.e. 1:14 is linkage group 1 position 14 cM)

Chen et al. BMC Genomics 2008 9:543   doi:10.1186/1471-2164-9-543