Table 2

Lander-Waterman analysizs of viral genome coverage.

Virus Name

Total Sequences

Observed Coverage

Expected Coverage

Observed Redundancy

Expected Redundancy


WHV

121

0.84

1.00

14.86

18.45

MS2

283

0.93

1.00

40.29

40.20

M13

232

0.90

1.00

21.26

18.36

HRV 16

195

0.90

1.00

14.33

13.88

TA

148

0.93

1.00

11.29

10.22

NDV

349

0.97

1.00

13.72

11.65

Lambda

281

0.52

0.95

3.72

2.92


Observed coverage and redundancy was compared with the expected coverage and redundancy as predicted by the Lander-Waterman model for the total number of sequences in each assembly.

Djikeng et al. BMC Genomics 2008 9:5   doi:10.1186/1471-2164-9-5

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