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Open Access Highly Accessed Open Badges Research article

Toxicogenomic response of Pseudomonas aeruginosa to ortho-phenylphenol

Chantal W Nde1, Hyeung-Jin Jang1, Freshteh Toghrol2* and William E Bentley1

Author Affiliations

1 Center for Biosystems Research, University of Maryland Biotechnology Institute, College Park, Maryland 20742, USA

2 Microarray Research Laboratory, Biological and Economic Analysis Division, Office of Pesticide Programs, U. S. Environmental Protection Agency, Fort Meade, Maryland 20755, USA

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BMC Genomics 2008, 9:473  doi:10.1186/1471-2164-9-473

Published: 10 October 2008

Additional files

Additional File 1:

The raw data representing the entire genome (5900 genes) under control conditions (0 minutes) and experimental (after 20 and 60 minutes exposure to 0.82 mM OPP). This data has also been deposited in NCBI's Gene Expression Omnibus webcite and can be accessed through the GEO series accession number: GSE10604 webcite

Format: XLS Size: 3.5MB Download file

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Open Data

Additional File 2:

List of 509 functionally classified P. aeruginosa genes that were significantly up and downregulated after 20 and 60 minutes of OPP exposure. The genes were categorized into six groups based on their transcription patterns.

Format: DOC Size: 1.1MB Download file

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Open Data